RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-222ENST00000589235 VPS37CA5D8V6 355 aaPredicted RBP23.27■■□□□ 1.32
CIRBP-222ENST00000589235 KRT18P05783 430 aaKnown RBP23.27■■□□□ 1.32
CIRBP-222ENST00000589235 MAPTP10636 758 aaKnown RBP23.27■■□□□ 1.32
CIRBP-222ENST00000589235 HARSP12081 509 aaKnown RBP23.27■■□□□ 1.32
CIRBP-222ENST00000589235 KCNE1P15382 129 aa23.27■■□□□ 1.32
CIRBP-222ENST00000589235 RPL9P32969 192 aaKnown RBP23.27■■□□□ 1.32
CIRBP-222ENST00000589235 ABCD1P33897 745 aa23.27■■□□□ 1.32
CIRBP-222ENST00000589235 CUL4AQ13619 759 aa23.27■■□□□ 1.32
CIRBP-222ENST00000589235 NOLC1Q14978 699 aaKnown RBP eCLIP23.27■■□□□ 1.32
CIRBP-222ENST00000589235 UVSSAQ2YD98 709 aa23.27■■□□□ 1.32
CIRBP-222ENST00000589235 RTL10Q7L3V2 364 aa23.27■■□□□ 1.32
CIRBP-222ENST00000589235 FEZF2Q8TBJ5 459 aa23.27■■□□□ 1.32
CIRBP-222ENST00000589235 BICD1Q96G01 975 aa23.27■■□□□ 1.32
CIRBP-222ENST00000589235 SNX27Q96L92 541 aa23.27■■□□□ 1.32
CIRBP-222ENST00000589235 ANKFY1Q9P2R3 1169 aa23.27■■□□□ 1.32
CIRBP-222ENST00000589235 EPS15L1Q9UBC2 864 aa23.27■■□□□ 1.32
CIRBP-222ENST00000589235 ZFP37Q9Y6Q3 630 aaPredicted RBP23.27■■□□□ 1.32
CIRBP-222ENST00000589235 XYLBO75191 536 aa23.26■■□□□ 1.31
CIRBP-222ENST00000589235 RAB33AQ14088 237 aa23.26■■□□□ 1.31
CIRBP-222ENST00000589235 SF3A1Q15459 793 aaKnown RBP23.26■■□□□ 1.31
CIRBP-222ENST00000589235 KYAT1Q16773 422 aa23.26■■□□□ 1.31
CIRBP-222ENST00000589235 CNTN3Q9P232 1028 aa23.26■■□□□ 1.31
CIRBP-222ENST00000589235 MTRRQ9UBK8 725 aa23.26■■□□□ 1.31
CIRBP-222ENST00000589235 NUB1Q9Y5A7 615 aa23.26■■□□□ 1.31
CIRBP-222ENST00000589235 BACE2Q9Y5Z0 518 aa23.26■■□□□ 1.31
CIRBP-222ENST00000589235 PODXLO00592 558 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 FAM13AO94988 1023 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 C8AP07357 584 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 HOXA9P31269 272 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 OR1D2P34982 312 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 NCKAP1LP55160 1127 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 IER5LQ5T953 404 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 GPBP1Q86WP2 473 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 MYCT1Q8N699 235 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 PLEKHA5Q9HAU0 1116 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 GOLGA2P5Q9HBQ8 144 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 FBXL21Q9UKT6 434 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 DUSP12Q9UNI6 340 aa23.25■■□□□ 1.31
CIRBP-222ENST00000589235 ABLIM1O14639 778 aa23.24■■□□□ 1.31
CIRBP-222ENST00000589235 FSHRP23945 695 aa23.24■■□□□ 1.31
CIRBP-222ENST00000589235 VCPP55072 806 aaKnown RBP23.24■■□□□ 1.31
CIRBP-222ENST00000589235 MCL1Q07820 350 aa23.24■■□□□ 1.31
CIRBP-222ENST00000589235 DHX8Q14562 1220 aaKnown RBP23.24■■□□□ 1.31
CIRBP-222ENST00000589235 ARSHQ5FYA8 562 aa23.24■■□□□ 1.31
CIRBP-222ENST00000589235 HAUS6Q7Z4H7 955 aa23.24■■□□□ 1.31
CIRBP-222ENST00000589235 ALYREFQ86V81 257 aaKnown RBP23.24■■□□□ 1.31
CIRBP-222ENST00000589235 PRSS33Q8NF86 280 aa23.24■■□□□ 1.31
CIRBP-222ENST00000589235 ZBTB45Q96K62 511 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-222ENST00000589235 PARVGQ9HBI0 331 aa23.24■■□□□ 1.31
CIRBP-222ENST00000589235 CDY1Q9Y6F8 540 aa23.24■■□□□ 1.31
CIRBP-222ENST00000589235 NPHP3-ACAD11A0A0J9YXS1 232 aa23.23■■□□□ 1.31
CIRBP-222ENST00000589235 H7C4K7 107 aa23.23■■□□□ 1.31
CIRBP-222ENST00000589235 SYN3O14994 580 aa23.23■■□□□ 1.31
CIRBP-222ENST00000589235 TKTP29401 623 aaKnown RBP23.23■■□□□ 1.31
CIRBP-222ENST00000589235 LIG4P49917 911 aa23.23■■□□□ 1.31
CIRBP-222ENST00000589235 CACNB1Q02641 598 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-222ENST00000589235 AXDND1Q5T1B0 1012 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-222ENST00000589235 GET4Q7L5D6 327 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-222ENST00000589235 RAD54LQ92698 747 aa23.23■■□□□ 1.31
CIRBP-222ENST00000589235 KCNN1Q92952 543 aa23.23■■□□□ 1.31
CIRBP-222ENST00000589235 SMOC2Q9H3U7 446 aa23.23■■□□□ 1.31
CIRBP-222ENST00000589235 CCDC39Q9UFE4 941 aa23.23■■□□□ 1.31
CIRBP-222ENST00000589235 POLIQ9UNA4 740 aa23.23■■□□□ 1.31
CIRBP-222ENST00000589235 TBCAO75347 108 aaKnown RBP23.22■■□□□ 1.31
CIRBP-222ENST00000589235 PDGFBP01127 241 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-222ENST00000589235 CLTAP09496 248 aa23.22■■□□□ 1.31
CIRBP-222ENST00000589235 LAMP2P13473 410 aa23.22■■□□□ 1.31
CIRBP-222ENST00000589235 BRCC3P46736 316 aa23.22■■□□□ 1.31
CIRBP-222ENST00000589235 SOX4Q06945 474 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-222ENST00000589235 ASTLQ6HA08 431 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-222ENST00000589235 GRASPQ7Z6J2 395 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-222ENST00000589235 ZMAT2Q96NC0 199 aaKnown RBP23.22■■□□□ 1.31
CIRBP-222ENST00000589235 MYADMQ96S97 322 aa23.22■■□□□ 1.31
CIRBP-222ENST00000589235 REEP2Q9BRK0 252 aa23.22■■□□□ 1.31
CIRBP-222ENST00000589235 ZHX3Q9H4I2 956 aa23.22■■□□□ 1.31
CIRBP-222ENST00000589235 K7ENM7 598 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 XPOTO43592 962 aaKnown RBP23.21■■□□□ 1.31
CIRBP-222ENST00000589235 TRAK2O60296 914 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 N4BP1O75113 896 aaKnown RBP23.21■■□□□ 1.31
CIRBP-222ENST00000589235 POU2F2P09086 479 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 PLCG1P19174 1290 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 ELF1P32519 619 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 DDIT3P35638 169 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 CLCN5P51795 746 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 KARSQ15046 597 aaKnown RBP23.21■■□□□ 1.31
CIRBP-222ENST00000589235 SLC10A6Q3KNW5 377 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 CD300LGQ6UXG3 332 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 C3orf58Q8NDZ4 430 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 APPL2Q8NEU8 664 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 SLC7A14Q8TBB6 771 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 LARP4BQ92615 738 aaKnown RBP23.21■■□□□ 1.31
CIRBP-222ENST00000589235 TSPAN18Q96SJ8 248 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 CCSER1Q9C0I3 900 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 TBX20Q9UMR3 447 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 PLXNA3P51805 1871 aa23.21■■□□□ 1.31
CIRBP-222ENST00000589235 DENND4AQ7Z401 1863 aa23.2■■□□□ 1.3
CIRBP-222ENST00000589235 I3L4J1 428 aa23.2■■□□□ 1.3
CIRBP-222ENST00000589235 HNRNPDLO14979 420 aaKnown RBP23.2■■□□□ 1.3
CIRBP-222ENST00000589235 CCL16O15467 120 aa23.2■■□□□ 1.3
CIRBP-222ENST00000589235 ADAM12O43184 909 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms