RNA–Protein interactions for RNA: ENST00000589228.5

PRKAR1A-217, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-217ENST00000589228 MTMR9Q96QG7 549 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 KLC2Q9H0B6 622 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 TPX2Q9ULW0 747 aaKnown RBP12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 REXO2Q9Y3B8 237 aaKnown RBP12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 TISP43B9A030 160 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 CAND2O75155 1236 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 SLC4A1P02730 911 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 KRT7P08729 469 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 COILP38432 576 aaPredicted RBP12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 NOP14P78316 857 aaKnown RBP12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 MIIPQ5JXC2 388 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 SPATA21Q7Z572 469 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 COL23A1Q86Y22 540 aaPredicted RBP12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 HAS1Q92839 578 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 SPATA33Q96N06 139 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 DHX35Q9H5Z1 703 aaKnown RBP12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 TMEM8AQ9HCN3 771 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 ASNSD1Q9NWL6 643 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 KCND2Q9NZV8 630 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 CNOT7Q9UIV1 285 aaKnown RBP12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 ZFP69BQ9UJL9 534 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 PPP1R9AQ9ULJ8 1098 aa12.79□□□□□ -0.36
PRKAR1A-217ENST00000589228 GMNNO75496 209 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 ERVK-9P63128 1117 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 ZSWIM1Q9BR11 485 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 HSD3B7Q9H2F3 369 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 STRIP2Q9ULQ0 834 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 NEU2Q9Y3R4 380 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 DDX3XO00571 662 aaKnown RBP eCLIP12.78□□□□□ -0.361e-17■■■■□ 19.9
PRKAR1A-217ENST00000589228 XPOTO43592 962 aaKnown RBP12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 DCTN3O75935 186 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 TKFCQ3LXA3 575 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 SH2D4BQ5SQS7 431 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 TRIM72Q6ZMU5 477 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 SLC47A2Q86VL8 602 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 VPS11Q9H270 941 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 ACP6Q9NPH0 428 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 FBXO40Q9UH90 709 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 MAP2K7O14733 419 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 MAP3K6O95382 1288 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 ITIH2P19823 946 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 OSBPP22059 807 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 EMC2Q15006 297 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 LPAR1Q92633 364 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 MMTAG2Q9BU76 263 aaKnown RBP12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 PABPC3Q9H361 631 aaKnown RBP12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 LCMT1Q9UIC8 334 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 TLK1Q9UKI8 766 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 TBX20Q9UMR3 447 aa12.78□□□□□ -0.36
PRKAR1A-217ENST00000589228 DLG5Q8TDM6 1919 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 CREB3O43889 395 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 PRKCBP05771 671 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 KRT10P13645 584 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 EIF3EP60228 445 aaKnown RBP12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 GPR162Q16538 588 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 MMEL1Q495T6 779 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 TMEM119Q4V9L6 283 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 SPOPLQ6IQ16 392 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 APOBEC3HQ6NTF7 200 aaKnown RBP12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 TRIM42Q8IWZ5 723 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 ATP11CQ8NB49 1132 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 FAM167AQ96KS9 214 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 TTC25Q96NG3 672 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 MOV10L1Q9BXT6 1211 aaKnown RBP12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 SEMA4AQ9H3S1 761 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 AIPL1Q9NZN9 384 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 GTF3C4Q9UKN8 822 aa12.77□□□□□ -0.36
PRKAR1A-217ENST00000589228 MYBL1P10243 752 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 RRM1P23921 792 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 IREB2P48200 963 aaKnown RBP12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 NBPF9Q3BBW0 867 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 LRRC55Q6ZSA7 311 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 ATP8B4Q8TF62 1192 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 NUF2Q9BZD4 464 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 SLC5A4Q9NY91 659 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 SLITRK3O94933 977 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 APRTP07741 180 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 PDHA1P08559 390 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 ADORA2BP29275 332 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 GTF2H1P32780 548 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 STAT4Q14765 748 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 CYP4A22Q5TCH4 519 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 AGBL2Q5U5Z8 902 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 LRRC34Q8IZ02 419 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 RAPGEF5Q92565 580 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 TNFRSF25Q93038 417 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 ZKSCAN4Q969J2 545 aaPredicted RBP12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 ATXN7L3BQ96GX2 97 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 DEFB129Q9H1M3 183 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 SMYD3Q9H7B4 428 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 CPSF2Q9P2I0 782 aaKnown RBP12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 PDE4DIPQ5VU43 2346 aa12.77□□□□□ -0.37
PRKAR1A-217ENST00000589228 LPXNO60711 386 aa12.76□□□□□ -0.37
PRKAR1A-217ENST00000589228 SLC1A1P43005 524 aa12.76□□□□□ -0.37
PRKAR1A-217ENST00000589228 PHKA2P46019 1235 aa12.76□□□□□ -0.37
PRKAR1A-217ENST00000589228 NPTX2P47972 431 aa12.76□□□□□ -0.37
PRKAR1A-217ENST00000589228 EPHB1P54762 984 aa12.76□□□□□ -0.37
PRKAR1A-217ENST00000589228 ORC1Q13415 861 aa12.76□□□□□ -0.37
PRKAR1A-217ENST00000589228 SEPT6Q14141 434 aa12.76□□□□□ -0.37
PRKAR1A-217ENST00000589228 CRLF3Q8IUI8 442 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms