RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 INVSQ9Y283 1065 aa9.08□□□□□ -0.96
ATG4D-210ENST00000588972 COA3Q9Y2R0 106 aaPredicted RBP9.08□□□□□ -0.96
ATG4D-210ENST00000588972 MYPNQ86TC9 1320 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 ADGRA2Q96PE1 1338 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 TMEM265A0A087WTH1 108 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 FADS2P1A8MWK0 482 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 C1QTNF9BB2RNN3 333 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 CLASP2O75122 1294 aaKnown RBP9.07□□□□□ -0.96
ATG4D-210ENST00000588972 FRAT2O75474 233 aaPredicted RBP9.07□□□□□ -0.96
ATG4D-210ENST00000588972 DGKIO75912 1065 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 FARP2O94887 1054 aaPredicted RBP9.07□□□□□ -0.96
ATG4D-210ENST00000588972 CENPBP07199 599 aaPredicted RBP9.07□□□□□ -0.96
ATG4D-210ENST00000588972 ASGR2P07307 311 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 CCL5P13501 91 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 HOXD10P28358 340 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 PSMC4P43686 418 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 UBXN2AP68543 259 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 RBM10P98175 930 aaKnown RBP9.07□□□□□ -0.96
ATG4D-210ENST00000588972 GRM3Q14832 879 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 SEC23AQ15436 765 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 CLUL1Q15846 466 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 FKBP1CQ5VVH2 108 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 FRMD7Q6ZUT3 714 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 FAM83AQ86UY5 434 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 EXOC6Q8TAG9 804 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 NETO1Q8TDF5 533 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.07□□□□□ -0.96
ATG4D-210ENST00000588972 TBC1D22AQ8WUA7 517 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 ZKSCAN4Q969J2 545 aaPredicted RBP9.07□□□□□ -0.96
ATG4D-210ENST00000588972 TEKT1Q969V4 418 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 JMJD8Q96S16 334 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 MTA3Q9BTC8 594 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 G6PC3Q9BUM1 346 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 CD244Q9BZW8 370 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 SP110Q9HB58 689 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 SLC6A20Q9NP91 592 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.07□□□□□ -0.96
ATG4D-210ENST00000588972 CPA4Q9UI42 421 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 DSEQ9UL01 958 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 RWDD3Q9Y3V2 267 aa9.07□□□□□ -0.96
ATG4D-210ENST00000588972 MAST3O60307 1309 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 ERC2O15083 957 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 HMMRO75330 724 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 CYP17A1P05093 508 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 CD40P25942 277 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 CTGFP29279 349 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 CACNB3P54284 484 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 PPATQ06203 517 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 ACAP2Q15057 778 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 CPSF6Q16630 551 aaKnown RBP eCLIP9.06□□□□□ -0.96
ATG4D-210ENST00000588972 ARHGAP29Q52LW3 1261 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 CC2D1AQ6P1N0 951 aaPredicted RBP9.06□□□□□ -0.96
ATG4D-210ENST00000588972 EP400NLQ6ZTU2 488 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 ANKRD23Q86SG2 305 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 SLCO6A1Q86UG4 719 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 RIOX2Q8IUF8 465 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 UHMK1Q8TAS1 419 aaKnown RBP9.06□□□□□ -0.96
ATG4D-210ENST00000588972 TGFBRAP1Q8WUH2 860 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 MAP6Q96JE9 813 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 PARK7Q99497 189 aaKnown RBP9.06□□□□□ -0.96
ATG4D-210ENST00000588972 IL1RAPL2Q9NP60 686 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 DDX20Q9UHI6 824 aaKnown RBP9.06□□□□□ -0.96
ATG4D-210ENST00000588972 FPGT-TNNI3KV9GXZ4 949 aa9.06□□□□□ -0.96
ATG4D-210ENST00000588972 MYO5AQ9Y4I1 1855 aaKnown RBP9.06□□□□□ -0.96
ATG4D-210ENST00000588972 MGAMO43451 1857 aa9.05□□□□□ -0.96
ATG4D-210ENST00000588972 PDHXO00330 501 aa9.05□□□□□ -0.96
ATG4D-210ENST00000588972 PRKCZQ05513 592 aa9.05□□□□□ -0.96
ATG4D-210ENST00000588972 MROH9Q5TGP6 573 aa9.05□□□□□ -0.96
ATG4D-210ENST00000588972 TSHZ1Q6ZSZ6 1077 aa9.05□□□□□ -0.96
ATG4D-210ENST00000588972 NLGN4XQ8N0W4 816 aa9.05□□□□□ -0.96
ATG4D-210ENST00000588972 PJA1Q8NG27 643 aa9.05□□□□□ -0.96
ATG4D-210ENST00000588972 U2AF1L4Q8WU68 220 aaKnown RBP9.05□□□□□ -0.96
ATG4D-210ENST00000588972 JADE3Q92613 823 aa9.05□□□□□ -0.96
ATG4D-210ENST00000588972 EAF2Q96CJ1 260 aaPredicted RBP9.05□□□□□ -0.96
ATG4D-210ENST00000588972 ACAP3Q96P50 834 aa9.05□□□□□ -0.96
ATG4D-210ENST00000588972 ZNF341Q9BYN7 854 aa9.05□□□□□ -0.96
ATG4D-210ENST00000588972 KCNH7Q9NS40 1196 aa9.05□□□□□ -0.96
ATG4D-210ENST00000588972 ATP23Q9Y6H3 246 aa9.05□□□□□ -0.96
ATG4D-210ENST00000588972 A0A1W2PQ45 241 aaPredicted RBP9.04□□□□□ -0.96
ATG4D-210ENST00000588972 A0A1W2PQY0 241 aa9.04□□□□□ -0.96
ATG4D-210ENST00000588972 GALEQ14376 348 aa9.04□□□□□ -0.96
ATG4D-210ENST00000588972 TMEM132BQ14DG7 1078 aa9.04□□□□□ -0.96
ATG4D-210ENST00000588972 RRP12Q5JTH9 1297 aaKnown RBP9.04□□□□□ -0.96
ATG4D-210ENST00000588972 B3GNT9Q6UX72 402 aa9.04□□□□□ -0.96
ATG4D-210ENST00000588972 AACSQ86V21 672 aa9.04□□□□□ -0.96
ATG4D-210ENST00000588972 ERC1Q8IUD2 1116 aa9.04□□□□□ -0.96
ATG4D-210ENST00000588972 ZZZ3Q8IYH5 903 aa9.04□□□□□ -0.96
ATG4D-210ENST00000588972 GPR108Q9NPR9 543 aa9.04□□□□□ -0.96
ATG4D-210ENST00000588972 GNL3LQ9NVN8 582 aaKnown RBP9.04□□□□□ -0.96
ATG4D-210ENST00000588972 FBLN5Q9UBX5 448 aa9.04□□□□□ -0.96
ATG4D-210ENST00000588972 EBF1Q9UH73 591 aa9.04□□□□□ -0.96
ATG4D-210ENST00000588972 DBNLQ9UJU6 430 aaKnown RBP9.04□□□□□ -0.96
ATG4D-210ENST00000588972 MAST2Q6P0Q8 1798 aa9.04□□□□□ -0.96
ATG4D-210ENST00000588972 FRMPD2Q68DX3 1309 aaPredicted RBP9.04□□□□□ -0.96
ATG4D-210ENST00000588972 DOCK2Q92608 1830 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 SPTBN5Q9NRC6 3674 aaKnown RBP9.03□□□□□ -0.96
ATG4D-210ENST00000588972 KRIT1O00522 736 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 EIF5BO60841 1220 aaKnown RBP9.03□□□□□ -0.96
ATG4D-210ENST00000588972 CAPN2P17655 700 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 MCAMP43121 646 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms