RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 KRT31Q15323 416 aa18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 NOMO2Q5JPE7 1267 aa18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 RASIP1Q5U651 963 aa18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 BEST2Q8NFU1 509 aa18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 TMEM8AQ9HCN3 771 aa18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 INTS13Q9NVM9 706 aa18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 R3HCC1Q9Y3T6 440 aaKnown RBP18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 SMIM28A0A1B0GU29 152 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 DGKIO75912 1065 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 SERPINC1P01008 464 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 IBSPP21815 317 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 MXI1P50539 228 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 TFAMQ00059 246 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 MLLT1Q03111 559 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 VWA3BQ502W6 1294 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 HSP90AA4PQ58FG1 418 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 CLLU1OSQ5K130 101 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 FKBP15Q5T1M5 1219 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 KRT39Q6A163 491 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 JADE1Q6IE81 842 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 LRRC43Q8N309 656 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 HELQQ8TDG4 1101 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 ZFP42Q96MM3 310 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 UROC1Q96N76 676 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 UBE2OQ9C0C9 1292 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 KLK14Q9P0G3 267 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 ITGA11Q9UKX5 1188 aa18.35■□□□□ 0.53
SCAMP4-211ENST00000588907 GTPBP10A4D1E9 387 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 GOLGA6L3A6NEY3 463 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 MEIS3P2A8K0S8 358 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 H0YGN5 161 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 CBFA2T2O43439 604 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 GJB5O95377 273 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 NFICP08651 508 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 FGFR1P11362 822 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 ATP1A3P13637 1013 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 PAX3P23760 479 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 BMP8BP34820 402 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 COPB1P53618 953 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 DEFB103AP81534 67 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 KCNH2Q12809 1159 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 CMTR2Q8IYT2 770 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 RNPC3Q96LT9 517 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 FAM193BQ96PV7 902 aaPredicted RBP18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 PPP1R10Q96QC0 940 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 GDF15Q99988 308 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 NDST4Q9H3R1 872 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 RNF19AQ9NV58 838 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 INPP5FQ9Y2H2 1132 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 COL4A6Q14031 1691 aa18.34■□□□□ 0.53
SCAMP4-211ENST00000588907 LGALS16A8MUM7 142 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 TULP1O00294 542 aaPredicted RBP18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 PTGESO14684 152 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 MEFVO15553 781 aaPredicted RBP18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 UPP2O95045 317 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 TRIM49P0CI25 452 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 TRIM49CP0CI26 452 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 ATP2A2P16615 1042 aaKnown RBP18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 RPL9P32969 192 aaKnown RBP18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 FMO5P49326 533 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 SCNN1GP51170 649 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 DLG4P78352 724 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 FANCCQ00597 558 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 MYL7Q01449 175 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 RNASELQ05823 741 aaKnown RBP18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 TUSC3Q13454 348 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 ZBTB6Q15916 424 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 ZACNQ401N2 412 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 SARM1Q6SZW1 724 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 EFCAB13Q8IY85 973 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 CCDC150Q8NCX0 1101 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 GSTCDQ8NEC7 633 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 DDX27Q96GQ7 796 aaKnown RBP18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 ZMAT2Q96NC0 199 aaKnown RBP18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 CASD1Q96PB1 797 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 YME1L1Q96TA2 773 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 MTMR12Q9C0I1 747 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 INSL6Q9Y581 213 aa18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 TDRD15B5MCY1 1934 aaKnown RBP18.33■□□□□ 0.52
SCAMP4-211ENST00000588907 TRIP11Q15643 1979 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 TBKBP1A7MCY6 615 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 PES1O00541 588 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 PHACTR2O75167 634 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 BIRC3Q13489 604 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 MIIPQ5JXC2 388 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 GLRA4Q5JXX5 417 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 C1orf220Q5T0J3 134 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 C15orf39Q6ZRI6 1047 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 HERC6Q8IVU3 1022 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 PLEKHO2Q8TD55 490 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 ZNF689Q96CS4 500 aaPredicted RBP18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 ZBED2Q9BTP6 218 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 IMPG2Q9BZV3 1241 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 RC3H2Q9HBD1 1191 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 TBC1D13Q9NVG8 400 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 DPP3Q9NY33 737 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 TAB2Q9NYJ8 693 aa18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 FNDC1Q4ZHG4 1894 aaPredicted RBP18.32■□□□□ 0.52
SCAMP4-211ENST00000588907 A0A1B0GTH6 734 aa18.31■□□□□ 0.52
SCAMP4-211ENST00000588907 CAPN15O75808 1086 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms