RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 TFAMQ00059 246 aaKnown RBP24.04■■□□□ 1.44
ATG4D-209ENST00000588857 BFSP2Q13515 415 aa24.04■■□□□ 1.44
ATG4D-209ENST00000588857 LPIN1Q14693 890 aa24.04■■□□□ 1.44
ATG4D-209ENST00000588857 SLC10A6Q3KNW5 377 aa24.04■■□□□ 1.44
ATG4D-209ENST00000588857 CD302Q8IX05 232 aa24.04■■□□□ 1.44
ATG4D-209ENST00000588857 SPAG5Q96R06 1193 aa24.04■■□□□ 1.44
ATG4D-209ENST00000588857 AGO3Q9H9G7 860 aaKnown RBP24.04■■□□□ 1.44
ATG4D-209ENST00000588857 ERVK-5Q9HDB9 667 aa24.04■■□□□ 1.44
ATG4D-209ENST00000588857 PADI3Q9ULW8 664 aa24.04■■□□□ 1.44
ATG4D-209ENST00000588857 FHOD1Q9Y613 1164 aa24.04■■□□□ 1.44
ATG4D-209ENST00000588857 LRRC53A6NM62 1247 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 PQBP1O60828 265 aaKnown RBP24.03■■□□□ 1.44
ATG4D-209ENST00000588857 TMEM191BP0C7N4 346 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 ZSCAN20P17040 1043 aaPredicted RBP24.03■■□□□ 1.44
ATG4D-209ENST00000588857 CD52P31358 61 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 PIK3CAP42336 1068 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 ATN1P54259 1190 aaPredicted RBP24.03■■□□□ 1.44
ATG4D-209ENST00000588857 RAPGEF1Q13905 1077 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 UBXN11Q5T124 520 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 PDXDC1Q6P996 788 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 SLC39A5Q6ZMH5 540 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 SEMA4DQ92854 862 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 ANKRD36BP1Q96IX9 119 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 FAM84AQ96KN4 292 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 PLEKHA5Q9HAU0 1116 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 SNTG2Q9NY99 539 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 CD4P01730 458 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 MSNP26038 577 aaKnown RBP24.03■■□□□ 1.44
ATG4D-209ENST00000588857 IQCEQ6IPM2 695 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 GJB7Q6PEY0 223 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 CYP26C1Q6V0L0 522 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 TMTC1Q8IUR5 882 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 TMEM139Q8IV31 216 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 MTMR12Q9C0I1 747 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 NXF3Q9H4D5 531 aaKnown RBP24.03■■□□□ 1.44
ATG4D-209ENST00000588857 DNAJC12Q9UKB3 198 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 PLAGL2Q9UPG8 496 aa24.03■■□□□ 1.44
ATG4D-209ENST00000588857 ZC3H11AO75152 810 aaKnown RBP eCLIP24.02■■□□□ 1.44
ATG4D-209ENST00000588857 HLA-DRAP01903 254 aa24.02■■□□□ 1.44
ATG4D-209ENST00000588857 WDR44Q5JSH3 913 aa24.02■■□□□ 1.44
ATG4D-209ENST00000588857 SFMBT2Q5VUG0 894 aa24.02■■□□□ 1.44
ATG4D-209ENST00000588857 JADE1Q6IE81 842 aa24.02■■□□□ 1.44
ATG4D-209ENST00000588857 PHLDB3Q6NSJ2 640 aa24.02■■□□□ 1.44
ATG4D-209ENST00000588857 EFCAB13Q8IY85 973 aa24.02■■□□□ 1.44
ATG4D-209ENST00000588857 SYN2Q92777 582 aaPredicted RBP24.02■■□□□ 1.44
ATG4D-209ENST00000588857 NT5C1BQ96P26 610 aa24.02■■□□□ 1.44
ATG4D-209ENST00000588857 APOL6Q9BWW8 343 aa24.02■■□□□ 1.44
ATG4D-209ENST00000588857 UBE2TQ9NPD8 197 aaPredicted RBP24.02■■□□□ 1.44
ATG4D-209ENST00000588857 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.02■■□□□ 1.44
ATG4D-209ENST00000588857 PYCARDQ9ULZ3 195 aa24.02■■□□□ 1.44
ATG4D-209ENST00000588857 MYO6Q9UM54 1294 aa24.02■■□□□ 1.44
ATG4D-209ENST00000588857 HES2Q9Y543 173 aa24.02■■□□□ 1.44
ATG4D-209ENST00000588857 PDCD11Q14690 1871 aaKnown RBP24.01■■□□□ 1.43
ATG4D-209ENST00000588857 ARHGAP6O43182 974 aa24.01■■□□□ 1.43
ATG4D-209ENST00000588857 SELPP16109 830 aa24.01■■□□□ 1.43
ATG4D-209ENST00000588857 FECHP22830 423 aa24.01■■□□□ 1.43
ATG4D-209ENST00000588857 HNRNPH3P31942 346 aaKnown RBP24.01■■□□□ 1.43
ATG4D-209ENST00000588857 LRRC26Q2I0M4 334 aa24.01■■□□□ 1.43
ATG4D-209ENST00000588857 LRRC8DQ7L1W4 858 aa24.01■■□□□ 1.43
ATG4D-209ENST00000588857 TRAPPC11Q7Z392 1133 aa24.01■■□□□ 1.43
ATG4D-209ENST00000588857 STK33Q9BYT3 514 aa24.01■■□□□ 1.43
ATG4D-209ENST00000588857 IPPQ9Y573 584 aa24.01■■□□□ 1.43
ATG4D-209ENST00000588857 DCDC2CA8MYV0 355 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 MEFVO15553 781 aaPredicted RBP24■■□□□ 1.43
ATG4D-209ENST00000588857 LRRN2O75325 713 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 VNN1O95497 513 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 NFICP08651 508 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 NCOA4Q13772 614 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 TMEM132DQ14C87 1099 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 MEA1Q16626 185 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 TRAF7Q6Q0C0 670 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 ANKRD33Q7Z3H0 272 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 NT5DC4Q86YG4 428 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 HACE1Q8IYU2 909 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 OSBPL7Q9BZF2 842 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24■■□□□ 1.431e-7■■■■■ 271.5
ATG4D-209ENST00000588857 C1orf112Q9NSG2 853 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 PARP2Q9UGN5 583 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 PCDHB2Q9Y5E7 798 aa24■■□□□ 1.43
ATG4D-209ENST00000588857 ESPNB1AK53 854 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 RECQL4O94761 1208 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 TRPC3Q13507 836 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 WDR59Q6PJI9 974 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 ARHGEF19Q8IW93 802 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 PPM1KQ8N3J5 372 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 SNX27Q96L92 541 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 IMPG2Q9BZV3 1241 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 FAM105AQ9NUU6 356 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 AJAP1Q9UKB5 411 aaPredicted RBP23.99■■□□□ 1.43
ATG4D-209ENST00000588857 DERAQ9Y315 318 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 C2CD2Q9Y426 696 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 PITPNM1O00562 1244 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 CLSTN1O94985 981 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 AKAP5P24588 427 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 MFAP3P55082 362 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 JAM2P57087 298 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 CDK17Q00537 523 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 FMNL3Q8IVF7 1028 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 C7orf61Q8IZ16 206 aa23.99■■□□□ 1.43
ATG4D-209ENST00000588857 SMG8Q8ND04 991 aaKnown RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms