RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 GPR149Q86SP6 731 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 PIK3R5Q8WYR1 880 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 KCNN1Q92952 543 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 GOLGA2P5Q9HBQ8 144 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 C11orf16Q9NQ32 467 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 CNTN3Q9P232 1028 aa21.36■■□□□ 1.01
TPM4-208ENST00000588410 TFIP11Q9UBB9 837 aaKnown RBP21.36■■□□□ 1.01
TPM4-208ENST00000588410 SPTLC2O15270 562 aa21.35■■□□□ 1.01
TPM4-208ENST00000588410 TGM5O43548 720 aa21.35■■□□□ 1.01
TPM4-208ENST00000588410 CLTAP09496 248 aa21.35■■□□□ 1.01
TPM4-208ENST00000588410 SPATA31D3P0C874 917 aa21.35■■□□□ 1.01
TPM4-208ENST00000588410 PSMD5Q16401 504 aa21.35■■□□□ 1.01
TPM4-208ENST00000588410 KYAT1Q16773 422 aa21.35■■□□□ 1.01
TPM4-208ENST00000588410 C15orf39Q6ZRI6 1047 aa21.35■■□□□ 1.01
TPM4-208ENST00000588410 SPATA31D4Q6ZUB0 917 aa21.35■■□□□ 1.01
TPM4-208ENST00000588410 LINC00301Q8NCQ3 95 aa21.35■■□□□ 1.01
TPM4-208ENST00000588410 CMASQ8NFW8 434 aaPredicted RBP21.35■■□□□ 1.01
TPM4-208ENST00000588410 HDAC7Q8WUI4 952 aa21.35■■□□□ 1.01
TPM4-208ENST00000588410 ZMAT2Q96NC0 199 aaKnown RBP21.35■■□□□ 1.01
TPM4-208ENST00000588410 PANK2Q9BZ23 570 aa21.35■■□□□ 1.01
TPM4-208ENST00000588410 PLEKHA4Q9H4M7 779 aa21.35■■□□□ 1.01
TPM4-208ENST00000588410 PRR33A8MZF0 331 aa21.34■■□□□ 1.01
TPM4-208ENST00000588410 PODXLO00592 558 aa21.34■■□□□ 1.01
TPM4-208ENST00000588410 ZSCAN22P10073 491 aaPredicted RBP21.34■■□□□ 1.01
TPM4-208ENST00000588410 NMT1P30419 496 aaKnown RBP21.34■■□□□ 1.01
TPM4-208ENST00000588410 RPL9P32969 192 aaKnown RBP21.34■■□□□ 1.01
TPM4-208ENST00000588410 SOX4Q06945 474 aaPredicted RBP21.34■■□□□ 1.01
TPM4-208ENST00000588410 SLC10A6Q3KNW5 377 aa21.34■■□□□ 1.01
TPM4-208ENST00000588410 CCDC149Q6ZUS6 474 aa21.34■■□□□ 1.01
TPM4-208ENST00000588410 TDRD5Q8NAT2 981 aaKnown RBP21.34■■□□□ 1.01
TPM4-208ENST00000588410 SPRYD3Q8NCJ5 442 aa21.34■■□□□ 1.01
TPM4-208ENST00000588410 LNX1Q8TBB1 728 aaPredicted RBP21.34■■□□□ 1.01
TPM4-208ENST00000588410 DDX12PQ92771 950 aa21.34■■□□□ 1.01
TPM4-208ENST00000588410 PLEKHA5Q9HAU0 1116 aa21.34■■□□□ 1.01
TPM4-208ENST00000588410 CCDC195A0A1B0GUA6 201 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 C2CD4DB7Z1M9 353 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 PPP6R2O75170 966 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 PIGRP01833 764 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 CXCL8P10145 99 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 FGFR3P22607 806 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 GTF2BQ00403 316 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 CYP26C1Q6V0L0 522 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 SFR1Q86XK3 245 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 KREMEN2Q8NCW0 462 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 EDAQ92838 391 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 MSTO1Q9BUK6 570 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 NUB1Q9Y5A7 615 aa21.33■■□□□ 1.01
TPM4-208ENST00000588410 MYMKA6NI61 221 aa21.32■■□□□ 1
TPM4-208ENST00000588410 OGTO15294 1046 aa21.32■■□□□ 1
TPM4-208ENST00000588410 YEATS4O95619 227 aa21.32■■□□□ 1
TPM4-208ENST00000588410 GAP43P17677 238 aa21.32■■□□□ 1
TPM4-208ENST00000588410 PPP2R3AQ06190 1150 aa21.32■■□□□ 1
TPM4-208ENST00000588410 FOXD4L6Q3SYB3 417 aaPredicted RBP21.32■■□□□ 1
TPM4-208ENST00000588410 FOXD4L3Q6VB84 417 aaPredicted RBP21.32■■□□□ 1
TPM4-208ENST00000588410 MAP4K3Q8IVH8 894 aa21.32■■□□□ 1
TPM4-208ENST00000588410 PLCD3Q8N3E9 789 aa21.32■■□□□ 1
TPM4-208ENST00000588410 PDILTQ8N807 584 aa21.32■■□□□ 1
TPM4-208ENST00000588410 C18orf25Q96B23 403 aaPredicted RBP21.32■■□□□ 1
TPM4-208ENST00000588410 ACSF2Q96CM8 615 aaPredicted RBP21.32■■□□□ 1
TPM4-208ENST00000588410 FIZ1Q96SL8 496 aa21.32■■□□□ 1
TPM4-208ENST00000588410 CLSTN3Q9BQT9 956 aa21.32■■□□□ 1
TPM4-208ENST00000588410 HAPLN2Q9GZV7 340 aa21.32■■□□□ 1
TPM4-208ENST00000588410 RPF1Q9H9Y2 349 aaKnown RBP21.32■■□□□ 1
TPM4-208ENST00000588410 PIDD1Q9HB75 910 aa21.32■■□□□ 1
TPM4-208ENST00000588410 SEL1LQ9UBV2 794 aa21.32■■□□□ 1
TPM4-208ENST00000588410 USTQ9Y2C2 406 aa21.32■■□□□ 1
TPM4-208ENST00000588410 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.32■■□□□ 1
TPM4-208ENST00000588410 I3L4J1 428 aa21.31■■□□□ 1
TPM4-208ENST00000588410 RFPL2O75678 378 aa21.31■■□□□ 1
TPM4-208ENST00000588410 F13A1P00488 732 aa21.31■■□□□ 1
TPM4-208ENST00000588410 IDEP14735 1019 aa21.31■■□□□ 1
TPM4-208ENST00000588410 IGFBP6P24592 240 aaPredicted RBP21.31■■□□□ 1
TPM4-208ENST00000588410 BRCC3P46736 316 aa21.31■■□□□ 1
TPM4-208ENST00000588410 ZXDAP98168 799 aa21.31■■□□□ 1
TPM4-208ENST00000588410 ZC2HC1CQ53FD0 456 aaPredicted RBP21.31■■□□□ 1
TPM4-208ENST00000588410 LIN9Q5TKA1 542 aa21.31■■□□□ 1
TPM4-208ENST00000588410 LILRA6Q6PI73 481 aa21.31■■□□□ 1
TPM4-208ENST00000588410 ANKS3Q6ZW76 656 aa21.31■■□□□ 1
TPM4-208ENST00000588410 OTOP3Q7RTS5 596 aa21.31■■□□□ 1
TPM4-208ENST00000588410 C3orf58Q8NDZ4 430 aa21.31■■□□□ 1
TPM4-208ENST00000588410 SMG7Q92540 1137 aaKnown RBP21.31■■□□□ 1
TPM4-208ENST00000588410 KIF12Q96FN5 646 aa21.31■■□□□ 1
TPM4-208ENST00000588410 ST6GALNAC4Q9H4F1 302 aa21.31■■□□□ 1
TPM4-208ENST00000588410 MRPL44Q9H9J2 332 aaKnown RBP21.31■■□□□ 1
TPM4-208ENST00000588410 ZDHHC7Q9NXF8 308 aa21.31■■□□□ 1
TPM4-208ENST00000588410 HCN4Q9Y3Q4 1203 aa21.31■■□□□ 1
TPM4-208ENST00000588410 MEFVO15553 781 aaPredicted RBP21.3■■□□□ 1
TPM4-208ENST00000588410 TKTP29401 623 aaKnown RBP21.3■■□□□ 1
TPM4-208ENST00000588410 TNFSF9P41273 254 aa21.3■■□□□ 1
TPM4-208ENST00000588410 PTPN21Q16825 1174 aa21.3■■□□□ 1
TPM4-208ENST00000588410 SLFN12LQ6IEE8 588 aa21.3■■□□□ 1
TPM4-208ENST00000588410 CD300LGQ6UXG3 332 aa21.3■■□□□ 1
TPM4-208ENST00000588410 ZNF720Q7Z2F6 126 aa21.3■■□□□ 1
TPM4-208ENST00000588410 ZDHHC14Q8IZN3 488 aa21.3■■□□□ 1
TPM4-208ENST00000588410 FEZF2Q8TBJ5 459 aa21.3■■□□□ 1
TPM4-208ENST00000588410 STAMQ92783 540 aa21.3■■□□□ 1
TPM4-208ENST00000588410 HVCN1Q96D96 273 aa21.3■■□□□ 1
TPM4-208ENST00000588410 FAM212AQ96EL1 285 aa21.3■■□□□ 1
TPM4-208ENST00000588410 RHOBTB2Q9BYZ6 727 aa21.3■■□□□ 1
TPM4-208ENST00000588410 LRRC27Q9C0I9 530 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms