RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 NXPE3Q969Y0 559 aa18.57■□□□□ 0.56
TRIM47-203ENST00000586495 SNX27Q96L92 541 aa18.57■□□□□ 0.56
TRIM47-203ENST00000586495 KCNK12Q9HB15 430 aa18.57■□□□□ 0.56
TRIM47-203ENST00000586495 GOLGA2P5Q9HBQ8 144 aa18.57■□□□□ 0.56
TRIM47-203ENST00000586495 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.57■□□□□ 0.56
TRIM47-203ENST00000586495 EPS15L1Q9UBC2 864 aa18.57■□□□□ 0.56
TRIM47-203ENST00000586495 TRIOO75962 3097 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 TRIP11Q15643 1979 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 VPS37CA5D8V6 355 aaPredicted RBP18.56■□□□□ 0.56
TRIM47-203ENST00000586495 ABLIM1O14639 778 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 PDGFBP01127 241 aaPredicted RBP18.56■□□□□ 0.56
TRIM47-203ENST00000586495 MAPTP10636 758 aaKnown RBP18.56■□□□□ 0.56
TRIM47-203ENST00000586495 KCNE1P15382 129 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 SCP2P22307 547 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 HOXA9P31269 272 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 MATR3P43243 847 aaKnown RBP eCLIP18.56■□□□□ 0.56
TRIM47-203ENST00000586495 NOLC1Q14978 699 aaKnown RBP eCLIP18.56■□□□□ 0.56
TRIM47-203ENST00000586495 SF3A1Q15459 793 aaKnown RBP18.56■□□□□ 0.56
TRIM47-203ENST00000586495 PPM1LQ5SGD2 360 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 ALYREFQ86V81 257 aaKnown RBP18.56■□□□□ 0.56
TRIM47-203ENST00000586495 PRSS33Q8NF86 280 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 RASSF8Q8NHQ8 419 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 ZBTB45Q96K62 511 aaPredicted RBP18.56■□□□□ 0.56
TRIM47-203ENST00000586495 IRF2BPLQ9H1B7 796 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 MFSD1Q9H3U5 465 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 SMOC2Q9H3U7 446 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 CNTN3Q9P232 1028 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 ANKFY1Q9P2R3 1169 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 MTRRQ9UBK8 725 aa18.56■□□□□ 0.56
TRIM47-203ENST00000586495 MYH11P35749 1972 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 ZDBF2Q9HCK1 2354 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 PODXLO00592 558 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 CLDN3O15551 220 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 N4BP1O75113 896 aaKnown RBP18.55■□□□□ 0.56
TRIM47-203ENST00000586495 XYLBO75191 536 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 C8AP07357 584 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 RPL9P32969 192 aaKnown RBP18.55■□□□□ 0.56
TRIM47-203ENST00000586495 OR1D2P34982 312 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 VCPP55072 806 aaKnown RBP18.55■□□□□ 0.56
TRIM47-203ENST00000586495 NCKAP1LP55160 1127 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 CACNB1Q02641 598 aaPredicted RBP18.55■□□□□ 0.56
TRIM47-203ENST00000586495 SOX4Q06945 474 aaPredicted RBP18.55■□□□□ 0.56
TRIM47-203ENST00000586495 RAB33AQ14088 237 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 UVSSAQ2YD98 709 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 ARSHQ5FYA8 562 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 RTL10Q7L3V2 364 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 HAUS6Q7Z4H7 955 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 GPBP1Q86WP2 473 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 BICD1Q96G01 975 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 ZMAT2Q96NC0 199 aaKnown RBP18.55■□□□□ 0.56
TRIM47-203ENST00000586495 DUSP12Q9UNI6 340 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 BACE2Q9Y5Z0 518 aa18.55■□□□□ 0.56
TRIM47-203ENST00000586495 NPHP3-ACAD11A0A0J9YXS1 232 aa18.54■□□□□ 0.56
TRIM47-203ENST00000586495 FAM13AO94988 1023 aa18.54■□□□□ 0.56
TRIM47-203ENST00000586495 TKTP29401 623 aaKnown RBP18.54■□□□□ 0.56
TRIM47-203ENST00000586495 BRCC3P46736 316 aa18.54■□□□□ 0.56
TRIM47-203ENST00000586495 MCL1Q07820 350 aa18.54■□□□□ 0.56
TRIM47-203ENST00000586495 DHX8Q14562 1220 aaKnown RBP18.54■□□□□ 0.56
TRIM47-203ENST00000586495 KYAT1Q16773 422 aa18.54■□□□□ 0.56
TRIM47-203ENST00000586495 CD300LGQ6UXG3 332 aa18.54■□□□□ 0.56
TRIM47-203ENST00000586495 MYCT1Q8N699 235 aa18.54■□□□□ 0.56
TRIM47-203ENST00000586495 KCNN1Q92952 543 aa18.54■□□□□ 0.56
TRIM47-203ENST00000586495 MYADMQ96S97 322 aa18.54■□□□□ 0.56
TRIM47-203ENST00000586495 FBXL21Q9UKT6 434 aa18.54■□□□□ 0.56
TRIM47-203ENST00000586495 NUB1Q9Y5A7 615 aa18.54■□□□□ 0.56
TRIM47-203ENST00000586495 CDY1Q9Y6F8 540 aa18.54■□□□□ 0.56
TRIM47-203ENST00000586495 ZFP37Q9Y6Q3 630 aaPredicted RBP18.54■□□□□ 0.56
TRIM47-203ENST00000586495 ADAM12O43184 909 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 KRT18P05783 430 aaKnown RBP18.53■□□□□ 0.56
TRIM47-203ENST00000586495 LAMP2P13473 410 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 PLCG1P19174 1290 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 FSHRP23945 695 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 ABCD1P33897 745 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 MCM6Q14566 821 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 AXDND1Q5T1B0 1012 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-203ENST00000586495 GET4Q7L5D6 327 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-203ENST00000586495 GRASPQ7Z6J2 395 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-203ENST00000586495 C3orf58Q8NDZ4 430 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 RAD54LQ92698 747 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 REEP2Q9BRK0 252 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 CCSER1Q9C0I3 900 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 PLEKHA5Q9HAU0 1116 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 PARVGQ9HBI0 331 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 BLOC1S4Q9NUP1 217 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-203ENST00000586495 VWA8A3KMH1 1905 aa18.53■□□□□ 0.56
TRIM47-203ENST00000586495 CITO14578 2027 aa18.52■□□□□ 0.56
TRIM47-203ENST00000586495 H7C4K7 107 aa18.52■□□□□ 0.56
TRIM47-203ENST00000586495 K7ENM7 598 aa18.52■□□□□ 0.56
TRIM47-203ENST00000586495 SYN3O14994 580 aa18.52■□□□□ 0.56
TRIM47-203ENST00000586495 TRAK2O60296 914 aa18.52■□□□□ 0.56
TRIM47-203ENST00000586495 POU2F2P09086 479 aa18.52■□□□□ 0.56
TRIM47-203ENST00000586495 CLTAP09496 248 aa18.52■□□□□ 0.56
TRIM47-203ENST00000586495 IGFBP6P24592 240 aaPredicted RBP18.52■□□□□ 0.56
TRIM47-203ENST00000586495 LIG4P49917 911 aa18.52■□□□□ 0.56
TRIM47-203ENST00000586495 TCF15Q12870 199 aa18.52■□□□□ 0.56
TRIM47-203ENST00000586495 KARSQ15046 597 aaKnown RBP18.52■□□□□ 0.56
TRIM47-203ENST00000586495 SLC10A6Q3KNW5 377 aa18.52■□□□□ 0.56
TRIM47-203ENST00000586495 ASTLQ6HA08 431 aaPredicted RBP18.52■□□□□ 0.56
TRIM47-203ENST00000586495 SLC7A14Q8TBB6 771 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms