RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 TXLNAP40222 546 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 RBM10P98175 930 aaKnown RBP13.52□□□□□ -0.25
ERCC2-207ENST00000586441 GRIN1Q05586 938 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 STX1AQ16623 288 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 ZNF568Q3ZCX4 644 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 HERC4Q5GLZ8 1057 aaPredicted RBP13.52□□□□□ -0.25
ERCC2-207ENST00000586441 KIAA1841Q6NSI8 718 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 DCLRE1AQ6PJP8 1040 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 C15orf39Q6ZRI6 1047 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 HAUS6Q7Z4H7 955 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 KRI1Q8N9T8 703 aaKnown RBP13.52□□□□□ -0.25
ERCC2-207ENST00000586441 CMASQ8NFW8 434 aaPredicted RBP13.52□□□□□ -0.25
ERCC2-207ENST00000586441 LARP4BQ92615 738 aaKnown RBP13.52□□□□□ -0.25
ERCC2-207ENST00000586441 RIPOR3Q96MK2 946 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 ACAP3Q96P50 834 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 PLIN2Q99541 437 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 TCHPQ9BT92 498 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 TARS2Q9BW92 718 aaKnown RBP13.52□□□□□ -0.25
ERCC2-207ENST00000586441 CDT1Q9H211 546 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 PLEKHA4Q9H4M7 779 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 EPHX3Q9H6B9 360 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 PLEKHA5Q9HAU0 1116 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 PARVGQ9HBI0 331 aa13.52□□□□□ -0.25
ERCC2-207ENST00000586441 SF3B1O75533 1304 aaKnown RBP eCLIP13.52□□□□□ -0.25
ERCC2-207ENST00000586441 MTCL1Q9Y4B5 1905 aaKnown RBP13.52□□□□□ -0.25
ERCC2-207ENST00000586441 CLDN3O15551 220 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 TRAPPC3O43617 180 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 POU5F1Q01860 360 aaKnown RBP13.51□□□□□ -0.25
ERCC2-207ENST00000586441 MCL1Q07820 350 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 KARSQ15046 597 aaKnown RBP13.51□□□□□ -0.25
ERCC2-207ENST00000586441 ATAT1Q5SQI0 421 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 LLGL2Q6P1M3 1020 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 RTL10Q7L3V2 364 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 GPBP1Q86WP2 473 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 RASSF8Q8NHQ8 419 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 AUTS2Q8WXX7 1259 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 EPSTI1Q96J88 318 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 FBXL18Q96ME1 805 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 REEP2Q9BRK0 252 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 GPR62Q9BZJ7 368 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 SFXN1Q9H9B4 322 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 ANO10Q9NW15 660 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 FAM13BQ9NYF5 915 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 SEL1LQ9UBV2 794 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 USTQ9Y2C2 406 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 USP20Q9Y2K6 914 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 GDAQ9Y2T3 454 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 NR2E1Q9Y466 385 aa13.51□□□□□ -0.25
ERCC2-207ENST00000586441 ARIH1Q9Y4X5 557 aaPredicted RBP13.51□□□□□ -0.25
ERCC2-207ENST00000586441 SMIM28A0A1B0GU29 152 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 A0A1B0GVL5 298 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 TEX28O15482 410 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 FAM13AO94988 1023 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 ZNF202O95125 648 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 PFKFB1P16118 471 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 MARCKSP29966 332 aaPredicted RBP13.5□□□□□ -0.25
ERCC2-207ENST00000586441 RPL9P32969 192 aaKnown RBP13.5□□□□□ -0.25
ERCC2-207ENST00000586441 CA8P35219 290 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 SYKP43405 635 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 NDUFA8P51970 172 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 GTF2BQ00403 316 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 MCM6Q14566 821 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 UPP1Q16831 310 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 TMEM31Q5JXX7 168 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 RESP18Q5W5W9 173 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 TAS1R1Q7RTX1 841 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 GPR149Q86SP6 731 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 RNF135Q8IUD6 432 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 ELOA2Q8IYF1 753 aaPredicted RBP13.5□□□□□ -0.25
ERCC2-207ENST00000586441 MYCT1Q8N699 235 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 PIK3R5Q8WYR1 880 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 KHSRPQ92945 711 aaKnown RBP eCLIP13.5□□□□□ -0.25
ERCC2-207ENST00000586441 CNTN3Q9P232 1028 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 HOOK1Q9UJC3 728 aaKnown RBP13.5□□□□□ -0.25
ERCC2-207ENST00000586441 TBX20Q9UMR3 447 aa13.5□□□□□ -0.25
ERCC2-207ENST00000586441 PRR33A8MZF0 331 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 GLUD1P00367 558 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 KRT18P05783 430 aaKnown RBP13.49□□□□□ -0.25
ERCC2-207ENST00000586441 ADRB2P07550 413 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 CLTAP09496 248 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 EPCAMP16422 314 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 RAD51AP2Q09MP3 1159 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 NOLC1Q14978 699 aaKnown RBP eCLIP13.49□□□□□ -0.25
ERCC2-207ENST00000586441 ANO6Q4KMQ2 910 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 RRAGBQ5VZM2 374 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 LILRA6Q6PI73 481 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.49□□□□□ -0.25
ERCC2-207ENST00000586441 USP49Q70CQ1 688 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 SV2BQ7L1I2 683 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 CD302Q8IX05 232 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 LRRC15Q8TF66 581 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 HVCN1Q96D96 273 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 CCDC34Q96HJ3 373 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 SNX27Q96L92 541 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 FIZ1Q96SL8 496 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 TTPALQ9BTX7 342 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 NAT10Q9H0A0 1025 aaKnown RBP13.49□□□□□ -0.25
ERCC2-207ENST00000586441 HPSEQ9Y251 543 aa13.49□□□□□ -0.25
ERCC2-207ENST00000586441 NPHP3-ACAD11A0A0J9YXS1 232 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms