RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 DNM1LO00429 736 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 HRO43593 1189 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 KIF5CO60282 957 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 NDUFA10O95299 355 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 KRT19P08727 400 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 CTSHP09668 335 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 SKIP12755 728 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 SLC9A1P19634 815 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 PROZP22891 400 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 SOX5P35711 763 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 THPOP40225 353 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 USP8P40818 1118 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 GRM5P41594 1212 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 KIF11P52732 1056 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 BPIFB4P59827 614 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 OSTNP61366 133 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 DLG4P78352 724 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 TFAMQ00059 246 aaKnown RBP6.67□□□□□ -1.34
LIG3-206ENST00000586058 ARID5AQ03989 594 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 KCNMA1Q12791 1236 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 KIF5AQ12840 1032 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 MYO1EQ12965 1108 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 PAK2Q13177 524 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 PTK7Q13308 1070 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 ARID5BQ14865 1188 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 TMEM132DQ14C87 1099 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 SNX17Q15036 470 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 MEA1Q16626 185 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 IFI16Q16666 785 aaKnown RBP6.67□□□□□ -1.34
LIG3-206ENST00000586058 ARHGAP44Q17R89 818 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 DUOXA2Q1HG44 320 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 ZNF699Q32M78 642 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 CBWD6Q4V339 395 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 EPC2Q52LR7 807 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 CBWD3Q5JTY5 395 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 CBWD5Q5RIA9 395 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 C10orf76Q5T2E6 689 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 PPP1R2P3Q6NXS1 205 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 RUFY4Q6ZNE9 571 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 SERINC5Q86VE9 423 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 CCAR2Q8N163 923 aaKnown RBP6.67□□□□□ -1.34
LIG3-206ENST00000586058 KLHDC9Q8NEP7 349 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 BORCS6Q96GS4 357 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 CPB2Q96IY4 423 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 C16orf45Q96MC5 204 aaPredicted RBP6.67□□□□□ -1.34
LIG3-206ENST00000586058 ZNF560Q96MR9 790 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 ALS2CR12Q96Q35 445 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 STK33Q9BYT3 514 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 IFIH1Q9BYX4 1025 aaKnown RBP6.67□□□□□ -1.34
LIG3-206ENST00000586058 CELF4Q9BZC1 486 aaKnown RBP6.67□□□□□ -1.34
LIG3-206ENST00000586058 TMEM117Q9H0C3 514 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 GANQ9H2C0 597 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 PDCL3Q9H2J4 239 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 TMX1Q9H3N1 280 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 NHEJ1Q9H9Q4 299 aaPredicted RBP6.67□□□□□ -1.34
LIG3-206ENST00000586058 PDE11AQ9HCR9 933 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 UBE2TQ9NPD8 197 aaPredicted RBP6.67□□□□□ -1.34
LIG3-206ENST00000586058 TSKSQ9UJT2 592 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 CPSF3Q9UKF6 684 aaKnown RBP6.67□□□□□ -1.34
LIG3-206ENST00000586058 PYCARDQ9ULZ3 195 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 PTPN22Q9Y2R2 807 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 PPP2R2CQ9Y2T4 447 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 DERAQ9Y315 318 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 FHOD1Q9Y613 1164 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 CDY2AQ9Y6F7 541 aa6.67□□□□□ -1.34
LIG3-206ENST00000586058 MYO16Q9Y6X6 1858 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 SCN5AQ14524 2016 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 A0A1B0GUA9 196 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 EIF3CLB5ME19 914 aaKnown RBP6.66□□□□□ -1.34
LIG3-206ENST00000586058 F8VZ95 297 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 B4GALT5O43286 388 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 B4GALT4O60513 344 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 LRRN2O75325 713 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 GPR32O75388 356 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 GFPT2O94808 682 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 HLA-DRAP01903 254 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 STAG3L1P0CL83 205 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 CXCL8P10145 99 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 ACTN1P12814 892 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 KRT5P13647 590 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 CAPN2P17655 700 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 FECHP22830 423 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 HOXC8P31273 242 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 ATICP31939 592 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 HNRNPH3P31942 346 aaKnown RBP6.66□□□□□ -1.34
LIG3-206ENST00000586058 CLCN1P35523 988 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 TNFSF9P41273 254 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 C1QTNF8P60827 252 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 TNNC1P63316 161 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 NOP14P78316 857 aaKnown RBP6.66□□□□□ -1.34
LIG3-206ENST00000586058 ADAM17P78536 824 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 GCNT1Q02742 428 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 PPP3CAQ08209 521 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 NFX1Q12986 1120 aaKnown RBP6.66□□□□□ -1.34
LIG3-206ENST00000586058 BFSP2Q13515 415 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 NCOA4Q13772 614 aa6.66□□□□□ -1.34
LIG3-206ENST00000586058 BMS1Q14692 1282 aaKnown RBP6.66□□□□□ -1.34
LIG3-206ENST00000586058 DRAP1Q14919 205 aaPredicted RBP6.66□□□□□ -1.34
LIG3-206ENST00000586058 ENOX2Q16206 610 aaKnown RBP6.66□□□□□ -1.34
LIG3-206ENST00000586058 PKN2Q16513 984 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms