RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 MAP7D2Q96T17 732 aa11.23□□□□□ -0.61
LIG3-203ENST00000585370 ACO2Q99798 780 aaKnown RBP11.23□□□□□ -0.61
LIG3-203ENST00000585370 FAM213AQ9BRX8 229 aa11.23□□□□□ -0.61
LIG3-203ENST00000585370 TARS2Q9BW92 718 aaKnown RBP11.23□□□□□ -0.61
LIG3-203ENST00000585370 IFIH1Q9BYX4 1025 aaKnown RBP11.23□□□□□ -0.61
LIG3-203ENST00000585370 PPP1R12CQ9BZL4 782 aa11.23□□□□□ -0.61
LIG3-203ENST00000585370 TMEM117Q9H0C3 514 aa11.23□□□□□ -0.61
LIG3-203ENST00000585370 L2HGDHQ9H9P8 463 aa11.23□□□□□ -0.61
LIG3-203ENST00000585370 LZTFL1Q9NQ48 299 aa11.23□□□□□ -0.61
LIG3-203ENST00000585370 REXO2Q9Y3B8 237 aaKnown RBP11.23□□□□□ -0.61
LIG3-203ENST00000585370 REV3LO60673 3130 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 LRRIQ3A6PVS8 624 aaPredicted RBP11.22□□□□□ -0.61
LIG3-203ENST00000585370 OGTO15294 1046 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 ZEB2O60315 1214 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 CABYRO75952 493 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 FOSL2P15408 326 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 CYP2C18P33260 490 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 PBX2P40425 430 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 GCLMP48507 274 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 TUBB4BP68371 445 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 DLG4P78352 724 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 MCL1Q07820 350 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 BMS1Q14692 1282 aaKnown RBP11.22□□□□□ -0.61
LIG3-203ENST00000585370 DRAP1Q14919 205 aaPredicted RBP11.22□□□□□ -0.61
LIG3-203ENST00000585370 GRIK4Q16099 956 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 SLC18A3Q16572 532 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 ZNF569Q5MCW4 686 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 ZNF365Q70YC5 407 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 APBB1IPQ7Z5R6 666 aaPredicted RBP11.22□□□□□ -0.61
LIG3-203ENST00000585370 SRGAP1Q7Z6B7 1085 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 ZNF410Q86VK4 478 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 LRRC71Q8N4P6 559 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 TMEM199Q8N511 208 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 PLEKHO2Q8TD55 490 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 NRCAMQ92823 1304 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 CCDC127Q96BQ5 260 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 NT5C1BQ96P26 610 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 TCHPQ9BT92 498 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 KATNAL1Q9BW62 490 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 UBE2TQ9NPD8 197 aaPredicted RBP11.22□□□□□ -0.61
LIG3-203ENST00000585370 RAB20Q9NX57 234 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 INTUQ9ULD6 942 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 TNFSF13BQ9Y275 285 aa11.22□□□□□ -0.61
LIG3-203ENST00000585370 UMODL1Q5DID0 1318 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 CTAGE9A4FU28 777 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 BTNL10A8MVZ5 291 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 F8VZ95 297 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 DYNC1I1O14576 645 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 RIOK3O14730 519 aaKnown RBP11.21□□□□□ -0.61
LIG3-203ENST00000585370 TLR3O15455 904 aaKnown RBP11.21□□□□□ -0.61
LIG3-203ENST00000585370 TACC1O75410 805 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 PLEKP08567 350 aaPredicted RBP11.21□□□□□ -0.61
LIG3-203ENST00000585370 GNAT1P11488 350 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 DRP2Q13474 957 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 PRPF4BQ13523 1007 aaKnown RBP11.21□□□□□ -0.61
LIG3-203ENST00000585370 WDR44Q5JSH3 913 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 PHLDB3Q6NSJ2 640 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 MPZL3Q6UWV2 235 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 C15orf39Q6ZRI6 1047 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 SV2AQ7L0J3 742 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 UBE2Q2Q8WVN8 375 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 DHX38Q92620 1227 aaKnown RBP11.21□□□□□ -0.61
LIG3-203ENST00000585370 TIFAQ96CG3 184 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 PBX4Q9BYU1 374 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 INO80BQ9C086 356 aaPredicted RBP11.21□□□□□ -0.61
LIG3-203ENST00000585370 TRPV6Q9H1D0 765 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 ZNF576Q9H609 170 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 RBAKQ9NYW8 714 aaPredicted RBP11.21□□□□□ -0.61
LIG3-203ENST00000585370 CXXC1Q9P0U4 656 aaPredicted RBP11.21□□□□□ -0.61
LIG3-203ENST00000585370 GUCA1BQ9UMX6 200 aa11.21□□□□□ -0.61
LIG3-203ENST00000585370 SMIM35A0A1B0GVV1 85 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 INO80B-WBP1J3KQ70 363 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 B4GALT4O60513 344 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 URI1O94763 535 aaPredicted RBP11.2□□□□□ -0.62
LIG3-203ENST00000585370 IL18RAPO95256 599 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 SLU7O95391 586 aaKnown RBP11.2□□□□□ -0.62
LIG3-203ENST00000585370 F2P00734 622 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 ZNF286BP0CG31 522 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 DLATP10515 647 aaKnown RBP11.2□□□□□ -0.62
LIG3-203ENST00000585370 TNNI1P19237 187 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 PROZP22891 400 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 CLCN3P51790 818 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 BPIFB4P59827 614 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 IGBP1P78318 339 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 CYP27A1Q02318 531 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 GCNT1Q02742 428 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 PTK2Q05397 1052 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 MBTD1Q05BQ5 628 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 NCBP1Q09161 790 aaKnown RBP11.2□□□□□ -0.62
LIG3-203ENST00000585370 NAB2Q15742 525 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 IFI16Q16666 785 aaKnown RBP11.2□□□□□ -0.62
LIG3-203ENST00000585370 TMEM132AQ24JP5 1023 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 ZACNQ401N2 412 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 ATF7IP2Q5U623 682 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 CRELD2Q6UXH1 353 aaPredicted RBP11.2□□□□□ -0.62
LIG3-203ENST00000585370 BRSK2Q8IWQ3 736 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 NME8Q8N427 588 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 ZSWIM2Q8NEG5 633 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 TRIM58Q8NG06 486 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms