RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-210ENST00000584960 COLEC11Q9BWP8 271 aa16.06■□□□□ 0.16
RIOK3-210ENST00000584960 SPG21Q9NZD8 308 aa16.06■□□□□ 0.16
RIOK3-210ENST00000584960 TMEM63CQ9P1W3 806 aa16.06■□□□□ 0.16
RIOK3-210ENST00000584960 H3BNC9 293 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 ZC3H11AO75152 810 aaKnown RBP eCLIP16.05■□□□□ 0.16
RIOK3-210ENST00000584960 CD44P16070 742 aaKnown RBP16.05■□□□□ 0.16
RIOK3-210ENST00000584960 PAX3P23760 479 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 CTNNB1P35222 781 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 FXR1P51114 621 aaKnown RBP eCLIP16.05■□□□□ 0.16
RIOK3-210ENST00000584960 PLCB3Q01970 1234 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 KRT17Q04695 432 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 UBE3AQ05086 875 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 PAK1Q13153 545 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 ANKRD40Q6AI12 368 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 CAVIN1Q6NZI2 390 aaKnown RBP16.05■□□□□ 0.16
RIOK3-210ENST00000584960 DCLRE1AQ6PJP8 1040 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 FBXO22Q8NEZ5 403 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 NELFBQ8WX92 580 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 FAM212AQ96EL1 285 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 KIF12Q96FN5 646 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 LRCH3Q96II8 777 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 ZMAT2Q96NC0 199 aaKnown RBP16.05■□□□□ 0.16
RIOK3-210ENST00000584960 C17orf80Q9BSJ5 609 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 PUF60Q9UHX1 559 aaKnown RBP16.05■□□□□ 0.16
RIOK3-210ENST00000584960 RWDD2AQ9UIY3 292 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 PLAGL2Q9UPG8 496 aa16.05■□□□□ 0.16
RIOK3-210ENST00000584960 NRP1O14786 923 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 MEFVO15553 781 aaPredicted RBP16.04■□□□□ 0.16
RIOK3-210ENST00000584960 ARHGEF15O94989 841 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 FGFR1OPO95684 399 aaKnown RBP16.04■□□□□ 0.16
RIOK3-210ENST00000584960 ERCC5P28715 1186 aaPredicted RBP16.04■□□□□ 0.16
RIOK3-210ENST00000584960 PSMC2P35998 433 aaKnown RBP16.04■□□□□ 0.16
RIOK3-210ENST00000584960 CYP24A1Q07973 514 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 TMEM132DQ14C87 1099 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 PSMD6Q15008 389 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 NFKBIBQ15653 356 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 GLRA4Q5JXX5 417 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 SPATA1Q5VX52 437 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 CEP135Q66GS9 1140 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 CBWD2Q8IUF1 395 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 ZC3H3Q8IXZ2 948 aaKnown RBP16.04■□□□□ 0.16
RIOK3-210ENST00000584960 SLC39A11Q8N1S5 342 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 RDH13Q8NBN7 331 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 ZSWIM2Q8NEG5 633 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 BEST2Q8NFU1 509 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 NOC3LQ8WTT2 800 aaKnown RBP16.04■□□□□ 0.16
RIOK3-210ENST00000584960 CEP63Q96MT8 703 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 FNBP1Q96RU3 617 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 LMAN2LQ9H0V9 348 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 ANO10Q9NW15 660 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 DNAJB4Q9UDY4 337 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 LZTS1Q9Y250 596 aa16.04■□□□□ 0.16
RIOK3-210ENST00000584960 LRPAP1P30533 357 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 OR1G1P47890 313 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 SLC11A1P49279 550 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 AP3M2P53677 418 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 MCCD1P59942 119 aaPredicted RBP16.03■□□□□ 0.16
RIOK3-210ENST00000584960 GPM6BQ13491 265 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 BMS1Q14692 1282 aaKnown RBP16.03■□□□□ 0.16
RIOK3-210ENST00000584960 JADE1Q6IE81 842 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 KLHL10Q6JEL2 608 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 INTS8Q75QN2 995 aaKnown RBP16.03■□□□□ 0.16
RIOK3-210ENST00000584960 FILIP1Q7Z7B0 1213 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 WDR49Q8IV35 697 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 KLHL23Q8NBE8 558 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 TMC2Q8TDI7 906 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 ARNTL2Q8WYA1 636 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 TMEM169Q96HH4 297 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 CXCL16Q9H2A7 254 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 TTYH1Q9H313 450 aaPredicted RBP16.03■□□□□ 0.16
RIOK3-210ENST00000584960 LMCD1Q9NZU5 365 aa16.03■□□□□ 0.16
RIOK3-210ENST00000584960 TMEM189-UBE2V1I3L0A0 370 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 IKBKBO14920 756 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 SLC16A3O15427 465 aaKnown RBP16.02■□□□□ 0.16
RIOK3-210ENST00000584960 FGF18O76093 207 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 GNA14O95837 355 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 EPB41P11171 864 aaKnown RBP16.02■□□□□ 0.16
RIOK3-210ENST00000584960 KRT13P13646 458 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 CLDN10P78369 228 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 ELAVL2Q12926 359 aaKnown RBP16.02■□□□□ 0.16
RIOK3-210ENST00000584960 STX1AQ16623 288 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 UPP1Q16831 310 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 DUOXA2Q1HG44 320 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 PDE12Q6L8Q7 609 aaKnown RBP16.02■□□□□ 0.16
RIOK3-210ENST00000584960 TTI2Q6NXR4 508 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 IGSF21Q96ID5 467 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 ANKRD36BP1Q96IX9 119 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 METTL14Q9HCE5 456 aaKnown RBP16.02■□□□□ 0.16
RIOK3-210ENST00000584960 PDE11AQ9HCR9 933 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 MTUS1Q9ULD2 1270 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 CTNND2Q9UQB3 1225 aa16.02■□□□□ 0.16
RIOK3-210ENST00000584960 LAMA3Q16787 3333 aa16.01■□□□□ 0.15
RIOK3-210ENST00000584960 TRIM49BA6NDI0 452 aa16.01■□□□□ 0.15
RIOK3-210ENST00000584960 TRAPPC3O43617 180 aa16.01■□□□□ 0.15
RIOK3-210ENST00000584960 AKAP3O75969 853 aa16.01■□□□□ 0.15
RIOK3-210ENST00000584960 TNNI1P19237 187 aa16.01■□□□□ 0.15
RIOK3-210ENST00000584960 CASP4P49662 377 aa16.01■□□□□ 0.15
RIOK3-210ENST00000584960 PMS1P54277 932 aaKnown RBP16.01■□□□□ 0.15
RIOK3-210ENST00000584960 PTPROQ16827 1216 aa16.01■□□□□ 0.15
RIOK3-210ENST00000584960 DPCR1Q3MIW9 517 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms