RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CYP11B2P19099 503 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 FSHRP23945 695 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 MARCKSP29966 332 aaPredicted RBP17.21■□□□□ 0.35
SKA2-209ENST00000583976 PRPHP41219 470 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 NAMPTP43490 491 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
SKA2-209ENST00000583976 LIN9Q5TKA1 542 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 GPR65Q8IYL9 337 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 CEP120Q8N960 986 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 C3orf58Q8NDZ4 430 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 DEPTORQ8TB45 409 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 SLC7A14Q8TBB6 771 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
SKA2-209ENST00000583976 POLR3CQ9BUI4 534 aaPredicted RBP17.21■□□□□ 0.35
SKA2-209ENST00000583976 LRWD1Q9UFC0 647 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 MIA3Q5JRA6 1907 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 PP2D1A8MPX8 630 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 LRRN2O75325 713 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 BMP15O95972 392 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 THP07101 528 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 XRCC6P12956 609 aaKnown RBP eCLIP17.2■□□□□ 0.34
SKA2-209ENST00000583976 RPA1P27694 616 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 CDC25AP30304 524 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 PTPAQ15257 358 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 NT5DC1Q5TFE4 455 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 PARM1Q6UWI2 310 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 RSPO2Q6UXX9 243 aaPredicted RBP17.2■□□□□ 0.34
SKA2-209ENST00000583976 ADSSL1Q8N142 457 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 ITFG1Q8TB96 612 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 NACC1Q96RE7 527 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 RAB34Q9BZG1 259 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 HCFC1R1Q9NWW0 138 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 POLIQ9UNA4 740 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 R4GN57 208 aa17.2■□□□□ 0.34
SKA2-209ENST00000583976 PATJQ8NI35 1801 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 ZNF292O60281 2723 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 ACKR2O00590 384 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 TKTP29401 623 aaKnown RBP17.19■□□□□ 0.34
SKA2-209ENST00000583976 DNM1Q05193 864 aaKnown RBP17.19■□□□□ 0.34
SKA2-209ENST00000583976 GRIN1Q05586 938 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 PDIA5Q14554 519 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 STK38Q15208 465 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 PPM1LQ5SGD2 360 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 ARL6IP4Q66PJ3 421 aaKnown RBP17.19■□□□□ 0.34
SKA2-209ENST00000583976 CD300LGQ6UXG3 332 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 IGSF22Q8N9C0 903 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 ERMNQ8TAM6 284 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 CHAMP1Q96JM3 812 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 ADPGKQ9BRR6 497 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 BHMT2Q9H2M3 363 aa17.19■□□□□ 0.34
SKA2-209ENST00000583976 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.19■□□□□ 0.34
SKA2-209ENST00000583976 C1RP00736 705 aa17.18■□□□□ 0.34
SKA2-209ENST00000583976 GLULP15104 373 aa17.18■□□□□ 0.34
SKA2-209ENST00000583976 DDIT3P35638 169 aa17.18■□□□□ 0.34
SKA2-209ENST00000583976 CCT6AP40227 531 aaKnown RBP17.18■□□□□ 0.34
SKA2-209ENST00000583976 CLCNKBP51801 687 aa17.18■□□□□ 0.34
SKA2-209ENST00000583976 SOX4Q06945 474 aaPredicted RBP17.18■□□□□ 0.34
SKA2-209ENST00000583976 DCAF4L1Q3SXM0 396 aa17.18■□□□□ 0.34
SKA2-209ENST00000583976 ATF7IP2Q5U623 682 aa17.18■□□□□ 0.34
SKA2-209ENST00000583976 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.18■□□□□ 0.34
SKA2-209ENST00000583976 SNX29Q8TEQ0 813 aa17.18■□□□□ 0.34
SKA2-209ENST00000583976 ING5Q8WYH8 240 aa17.18■□□□□ 0.34
SKA2-209ENST00000583976 FGF13Q92913 245 aa17.18■□□□□ 0.34
SKA2-209ENST00000583976 DDX27Q96GQ7 796 aaKnown RBP17.18■□□□□ 0.34
SKA2-209ENST00000583976 PPP1R10Q96QC0 940 aaKnown RBP17.18■□□□□ 0.34
SKA2-209ENST00000583976 DLGAP2Q9P1A6 1054 aa17.18■□□□□ 0.34
SKA2-209ENST00000583976 CDH7Q9ULB5 785 aa17.18■□□□□ 0.34
SKA2-209ENST00000583976 EP300Q09472 2414 aaPredicted RBP17.18■□□□□ 0.34
SKA2-209ENST00000583976 FGFR3P22607 806 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 OR1D2P34982 312 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 BRCC3P46736 316 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 NASPP49321 788 aaPredicted RBP17.17■□□□□ 0.34
SKA2-209ENST00000583976 GPC5P78333 572 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 NUCB2P80303 420 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 PDCD11Q14690 1871 aaKnown RBP17.17■□□□□ 0.34
SKA2-209ENST00000583976 SLC39A14Q15043 492 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 ZRSR1Q15695 479 aaKnown RBP17.17■□□□□ 0.34
SKA2-209ENST00000583976 AXDND1Q5T1B0 1012 aaPredicted RBP17.17■□□□□ 0.34
SKA2-209ENST00000583976 HAUS3Q68CZ6 603 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 DCLRE1AQ6PJP8 1040 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 NPAS3Q8IXF0 933 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 FANCMQ8IYD8 2048 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 DAW1Q8N136 415 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 NXPE3Q969Y0 559 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 KXD1Q9BQD3 176 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 CDT1Q9H211 546 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 SLC2A4RGQ9NR83 387 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 DDX19AQ9NUU7 478 aaKnown RBP17.17■□□□□ 0.34
SKA2-209ENST00000583976 MTRRQ9UBK8 725 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 CDY1Q9Y6F8 540 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 PHLPP2Q6ZVD8 1323 aa17.17■□□□□ 0.34
SKA2-209ENST00000583976 TMEM189-UBE2V1I3L0A0 370 aa17.16■□□□□ 0.34
SKA2-209ENST00000583976 B3GAT3O94766 335 aa17.16■□□□□ 0.34
SKA2-209ENST00000583976 HNRNPA1P09651 372 aaKnown RBP eCLIP17.16■□□□□ 0.34
SKA2-209ENST00000583976 HOXA9P31269 272 aa17.16■□□□□ 0.34
SKA2-209ENST00000583976 OSTNP61366 133 aa17.16■□□□□ 0.34
SKA2-209ENST00000583976 PPP2R5AQ15172 486 aa17.16■□□□□ 0.34
SKA2-209ENST00000583976 ZNF568Q3ZCX4 644 aa17.16■□□□□ 0.34
SKA2-209ENST00000583976 KRT79Q5XKE5 535 aa17.16■□□□□ 0.34
SKA2-209ENST00000583976 POTEHQ6S545 545 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms