RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CYP11B1P15538 503 aa24.34■■□□□ 1.49
CCDC47-204ENST00000582252 ARHGAP1Q07960 439 aa24.34■■□□□ 1.49
CCDC47-204ENST00000582252 DRP2Q13474 957 aa24.34■■□□□ 1.49
CCDC47-204ENST00000582252 C8orf74Q6P047 294 aa24.34■■□□□ 1.49
CCDC47-204ENST00000582252 ZNF677Q86XU0 584 aa24.34■■□□□ 1.49
CCDC47-204ENST00000582252 BRSK2Q8IWQ3 736 aa24.34■■□□□ 1.49
CCDC47-204ENST00000582252 EMID1Q96A84 441 aaPredicted RBP24.34■■□□□ 1.49
CCDC47-204ENST00000582252 HAPLN2Q9GZV7 340 aa24.34■■□□□ 1.49
CCDC47-204ENST00000582252 THAP2Q9H0W7 228 aa24.34■■□□□ 1.49
CCDC47-204ENST00000582252 ACBD3Q9H3P7 528 aa24.34■■□□□ 1.49
CCDC47-204ENST00000582252 STXBP5LQ9Y2K9 1186 aa24.34■■□□□ 1.49
CCDC47-204ENST00000582252 SRGAP2CP0DJJ0 459 aa24.33■■□□□ 1.49
CCDC47-204ENST00000582252 FLT3LGP49771 235 aa24.33■■□□□ 1.49
CCDC47-204ENST00000582252 TNNC1P63316 161 aa24.33■■□□□ 1.49
CCDC47-204ENST00000582252 DUSP28Q4G0W2 176 aa24.33■■□□□ 1.49
CCDC47-204ENST00000582252 GLIPR1L2Q4G1C9 344 aa24.33■■□□□ 1.49
CCDC47-204ENST00000582252 NT5DC3Q86UY8 548 aa24.33■■□□□ 1.49
CCDC47-204ENST00000582252 ACTRT1Q8TDG2 376 aa24.33■■□□□ 1.49
CCDC47-204ENST00000582252 TATDN2Q93075 761 aa24.33■■□□□ 1.49
CCDC47-204ENST00000582252 MS4A14Q96JA4 679 aa24.33■■□□□ 1.49
CCDC47-204ENST00000582252 ACO2Q99798 780 aaKnown RBP24.33■■□□□ 1.49
CCDC47-204ENST00000582252 TCHPQ9BT92 498 aa24.33■■□□□ 1.49
CCDC47-204ENST00000582252 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.33■■□□□ 1.496e-6■■■□□ 15
CCDC47-204ENST00000582252 TAS2R14Q9NYV8 317 aa24.33■■□□□ 1.49
CCDC47-204ENST00000582252 L1RE1Q9UN81 338 aa24.33■■□□□ 1.49
CCDC47-204ENST00000582252 GPR25O00155 361 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 KRT5P13647 590 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 HSPA6P17066 643 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 TDRD10Q5VZ19 366 aaKnown RBP24.32■■□□□ 1.48
CCDC47-204ENST00000582252 SLC47A2Q86VL8 602 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 RHPN2Q8IUC4 686 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 LRRC71Q8N4P6 559 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 MAP2K7O14733 419 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 OGTO15294 1046 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 CHRNB2P17787 502 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 TBXAS1P24557 533 aaPredicted RBP24.32■■□□□ 1.48
CCDC47-204ENST00000582252 HOXD10P28358 340 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 CYP2C19P33261 490 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 PRKCZQ05513 592 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 MKRN4PQ13434 485 aaPredicted RBP24.32■■□□□ 1.48
CCDC47-204ENST00000582252 CLUL1Q15846 466 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 TAF3Q5VWG9 929 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 PALB2Q86YC2 1186 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 USP38Q8NB14 1042 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 PPTC7Q8NI37 304 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 HES6Q96HZ4 224 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 IMPG2Q9BZV3 1241 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 OSGEPQ9NPF4 335 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 GABRQQ9UN88 632 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 COL1A2P08123 1366 aa24.32■■□□□ 1.48
CCDC47-204ENST00000582252 MAGEB2O15479 319 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 BUB1BO60566 1050 aaPredicted RBP24.31■■□□□ 1.48
CCDC47-204ENST00000582252 PHACTR2O75167 634 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 HARSP12081 509 aaKnown RBP24.31■■□□□ 1.48
CCDC47-204ENST00000582252 FMO1Q01740 532 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 MCL1Q07820 350 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 TMEM63BQ5T3F8 832 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 C11orf63Q6NUN7 778 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 EFCAB12Q6NXP0 572 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 WDR49Q8IV35 697 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 ARHGEF26Q96DR7 871 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 LRRC1Q9BTT6 524 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 PI4K2AQ9BTU6 479 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 RBM12Q9NTZ6 932 aaKnown RBP24.31■■□□□ 1.48
CCDC47-204ENST00000582252 EHD2Q9NZN4 543 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 CTTNBP2NLQ9P2B4 639 aa24.31■■□□□ 1.48
CCDC47-204ENST00000582252 CNTNAP2Q9UHC6 1331 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 PGRMC1O00264 195 aaKnown RBP24.3■■□□□ 1.48
CCDC47-204ENST00000582252 CEP104O60308 925 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 SASH3O75995 380 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 GNRH1P01148 92 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 LGALS2P05162 132 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 EDN1P05305 212 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 MMEP08473 750 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 ZNF865P0CJ78 1059 aaPredicted RBP24.3■■□□□ 1.48
CCDC47-204ENST00000582252 SMPD1P17405 629 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 MFSD14CQ5VZR4 134 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 LMBRD2Q68DH5 695 aaPredicted RBP24.3■■□□□ 1.48
CCDC47-204ENST00000582252 SMYD5Q6GMV2 418 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 CD99L2Q8TCZ2 262 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 NFKBIZQ9BYH8 718 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 SMARCAL1Q9NZC9 954 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 A0A0U1RQG5 324 aaPredicted RBP24.3■■□□□ 1.48
CCDC47-204ENST00000582252 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.3■■□□□ 1.48
CCDC47-204ENST00000582252 ACKR2O00590 384 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 PLA2G4AP47712 749 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 TNFAIP2Q03169 654 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 POU5F1BQ06416 359 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 ARHGEF6Q15052 776 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 METTL13Q8N6R0 699 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 PCDHB18PQ96TA0 734 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.3■■□□□ 1.482e-7■■■□□ 17.9
CCDC47-204ENST00000582252 STIM2Q9P246 746 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 PCDHB2Q9Y5E7 798 aa24.3■■□□□ 1.48
CCDC47-204ENST00000582252 MTA2O94776 668 aa24.29■■□□□ 1.48
CCDC47-204ENST00000582252 TMEM132AQ24JP5 1023 aa24.29■■□□□ 1.48
CCDC47-204ENST00000582252 PRAMEF19Q5SWL8 479 aa24.29■■□□□ 1.48
CCDC47-204ENST00000582252 GJC2Q5T442 439 aaPredicted RBP24.29■■□□□ 1.48
CCDC47-204ENST00000582252 MPZL3Q6UWV2 235 aa24.29■■□□□ 1.48
CCDC47-204ENST00000582252 CCNI2Q6ZMN8 369 aaPredicted RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms