RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 FSD2A1L4K1 749 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 H0YGN5 161 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 P4HA2O15460 535 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 XPOTO43592 962 aaKnown RBP12.46□□□□□ -0.41
GGA3-211ENST00000582232 C4BPAP04003 597 aaKnown RBP12.46□□□□□ -0.41
GGA3-211ENST00000582232 THP07101 528 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 DLATP10515 647 aaKnown RBP12.46□□□□□ -0.41
GGA3-211ENST00000582232 TNNI1P19237 187 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 BMP8BP34820 402 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 MLH1P40692 756 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 KCNH2Q12809 1159 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 GRIK3Q13003 919 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 TMEM132DQ14C87 1099 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 NAB2Q15742 525 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 DUOXA2Q1HG44 320 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 HSP90AA4PQ58FG1 418 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 NOMO2Q5JPE7 1267 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 MIIPQ5JXC2 388 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 C15orf39Q6ZRI6 1047 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 EFCAB13Q8IY85 973 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 RNF169Q8NCN4 708 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 ZNF516Q92618 1163 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 CCDC127Q96BQ5 260 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 ZNF689Q96CS4 500 aaPredicted RBP12.46□□□□□ -0.41
GGA3-211ENST00000582232 FAM212AQ96EL1 285 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 ZFP42Q96MM3 310 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 ZMAT2Q96NC0 199 aaKnown RBP12.46□□□□□ -0.41
GGA3-211ENST00000582232 CASD1Q96PB1 797 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 RPS6KC1Q96S38 1066 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 SLC9A7Q96T83 725 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 TMEM117Q9H0C3 514 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 CXCL16Q9H2A7 254 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 RC3H2Q9HBD1 1191 aaKnown RBP12.46□□□□□ -0.41
GGA3-211ENST00000582232 TMEM8AQ9HCN3 771 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 SLC38A7Q9NVC3 462 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 MIOSQ9NXC5 875 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 KLK14Q9P0G3 267 aa12.46□□□□□ -0.41
GGA3-211ENST00000582232 CXXC1Q9P0U4 656 aaPredicted RBP12.46□□□□□ -0.41
GGA3-211ENST00000582232 ZBBXA8MT70 800 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 N4BP1O75113 896 aaKnown RBP12.45□□□□□ -0.42
GGA3-211ENST00000582232 GJB5O95377 273 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 AFPP02771 609 aaKnown RBP12.45□□□□□ -0.42
GGA3-211ENST00000582232 TPM2P07951 284 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 NFICP08651 508 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 TRIM49P0CI25 452 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 TRIM49CP0CI26 452 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 FGFR1P11362 822 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 AFF1P51825 1210 aaKnown RBP12.45□□□□□ -0.42
GGA3-211ENST00000582232 COPB1P53618 953 aaKnown RBP12.45□□□□□ -0.42
GGA3-211ENST00000582232 HTRA4P83105 476 aaPredicted RBP12.45□□□□□ -0.42
GGA3-211ENST00000582232 FANCCQ00597 558 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 PPP3CAQ08209 521 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 ZACNQ401N2 412 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 VWA3BQ502W6 1294 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 DCAF17Q5H9S7 520 aaPredicted RBP12.45□□□□□ -0.42
GGA3-211ENST00000582232 TCERG1LQ5VWI1 586 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 SARM1Q6SZW1 724 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 OR5B17Q8NGF7 314 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 CXorf38Q8TB03 319 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 URGCPQ8TCY9 931 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 HELQQ8TDG4 1101 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 KIF12Q96FN5 646 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 ANKRD36BP1Q96IX9 119 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 POP1Q99575 1024 aaKnown RBP12.45□□□□□ -0.42
GGA3-211ENST00000582232 MRPL9Q9BYD2 267 aaKnown RBP12.45□□□□□ -0.42
GGA3-211ENST00000582232 NDST4Q9H3R1 872 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 UBQLN1Q9UMX0 589 aaKnown RBP12.45□□□□□ -0.42
GGA3-211ENST00000582232 COQ4Q9Y3A0 265 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 SLC4A7Q9Y6M7 1214 aa12.45□□□□□ -0.42
GGA3-211ENST00000582232 A0A1B0GTH6 734 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 GTPBP10A4D1E9 387 aaKnown RBP12.44□□□□□ -0.42
GGA3-211ENST00000582232 LGALS16A8MUM7 142 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 TNNC2P02585 160 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 TMEM191BP0C7N4 346 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 LRPAP1P30533 357 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 GCLMP48507 274 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 FMO5P49326 533 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 SCNN1GP51170 649 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 TFAMQ00059 246 aaKnown RBP12.44□□□□□ -0.42
GGA3-211ENST00000582232 DSC1Q08554 894 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 PRPF38BQ5VTL8 546 aaKnown RBP12.44□□□□□ -0.42
GGA3-211ENST00000582232 KRT39Q6A163 491 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 SV2AQ7L0J3 742 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 TRAPPC11Q7Z392 1133 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 CREBRFQ8IUR6 639 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 ABI1Q8IZP0 508 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 BEST2Q8NFU1 509 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
GGA3-211ENST00000582232 TBC1D13Q9NVG8 400 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 TAB2Q9NYJ8 693 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 ITGA11Q9UKX5 1188 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 PLAGL2Q9UPG8 496 aa12.44□□□□□ -0.42
GGA3-211ENST00000582232 RANBP2P49792 3224 aaKnown RBP12.44□□□□□ -0.42
GGA3-211ENST00000582232 ANO9A1A5B4 782 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 UPP2O95045 317 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 SERPINC1P01008 464 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 ATP2A2P16615 1042 aaKnown RBP12.43□□□□□ -0.42
GGA3-211ENST00000582232 RPL9P32969 192 aaKnown RBP12.43□□□□□ -0.42
GGA3-211ENST00000582232 MXI1P50539 228 aa12.43□□□□□ -0.42
GGA3-211ENST00000582232 TUSC3Q13454 348 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms