RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 GTF2F1P35269 517 aaKnown RBP eCLIP14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 GRM5P41594 1212 aa14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 FANCCQ00597 558 aa14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 STK4Q13043 487 aa14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 PTPROQ16827 1216 aa14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 COBLL1Q53SF7 1204 aa14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 ZBTB33Q86T24 672 aa14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 CCDC150Q8NCX0 1101 aa14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 SMG8Q8ND04 991 aaKnown RBP14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 URGCPQ8TCY9 931 aa14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 DHTKD1Q96HY7 919 aaPredicted RBP14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 MSTO1Q9BUK6 570 aa14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 NXF3Q9H4D5 531 aaKnown RBP14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 RSAD1Q9HA92 442 aa14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 TOPORSQ9NS56 1045 aaPredicted RBP14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 GIT1Q9Y2X7 761 aa14.67□□□□□ -0.06
CSNK1D-220ENST00000581737 CFAP54Q96N23 3096 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 A0A0B4J269 797 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 ABLIM1O14639 778 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 OGTO15294 1046 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 FGFR1P11362 822 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 HARSP12081 509 aaKnown RBP14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 GARTP22102 1010 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 YARSP54577 528 aaKnown RBP14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 UBASH3AP57075 661 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 KCNA1Q09470 495 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 BTG3Q14201 252 aaPredicted RBP14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 NCAPHQ15003 741 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 KNOP1Q1ED39 458 aaKnown RBP14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 CTC1Q2NKJ3 1217 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 TIGD5Q53EQ6 642 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 IER5LQ5T953 404 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 KLHL10Q6JEL2 608 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 ADHFE1Q8IWW8 467 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 LRRC43Q8N309 656 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 GUF1Q8N442 669 aaKnown RBP14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 GLIS3Q8NEA6 775 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 POMGNT1Q8WZA1 660 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 ZNF689Q96CS4 500 aaPredicted RBP14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 APOL6Q9BWW8 343 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 NSUN3Q9H649 340 aaKnown RBP14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 RC3H2Q9HBD1 1191 aaKnown RBP14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 CTNND2Q9UQB3 1225 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 STYXL1Q9Y6J8 313 aa14.66□□□□□ -0.06
CSNK1D-220ENST00000581737 RALGAPA2Q2PPJ7 1873 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 CARNS1A5YM72 827 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 TBKBP1A7MCY6 615 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 GRM6O15303 877 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 LINC01565O15544 149 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 RECQL4O94761 1208 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 CSPG5O95196 566 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 CLTAP09496 248 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 HYAL1Q12794 435 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 NOMO2Q5JPE7 1267 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 CLLU1OSQ5K130 101 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 ARMCX5Q6P1M9 558 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 SLC39A4Q6P5W5 647 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 AGMOQ6ZNB7 445 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 NELFCDQ8IXH7 590 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 FIBCD1Q8N539 461 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 SPC24Q8NBT2 197 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 PRSS33Q8NF86 280 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 HELQQ8TDG4 1101 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 LPPQ93052 612 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 ZBTB45Q96K62 511 aaPredicted RBP14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 SNX27Q96L92 541 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 ACAP3Q96P50 834 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 RPS6KC1Q96S38 1066 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 TSG101Q99816 390 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 RNF19AQ9NV58 838 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 TYW1Q9NV66 732 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 IFNKQ9P0W0 207 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 KANSL3Q9P2N6 904 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 MAGEC2Q9UBF1 373 aaPredicted RBP14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 PRKAG3Q9UGI9 489 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 PARP2Q9UGN5 583 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 AGO2Q9UKV8 859 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 GDAQ9Y2T3 454 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 RWDD3Q9Y3V2 267 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 HES2Q9Y543 173 aa14.65□□□□□ -0.06
CSNK1D-220ENST00000581737 TDRD15B5MCY1 1934 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 ANKRD63C9JTQ0 380 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 INPPL1O15357 1258 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 TBX10O75333 385 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 LDHAP00338 332 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 POU5F1Q01860 360 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 SMAD2Q15796 467 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 FOXR2Q6PJQ5 311 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 RNF135Q8IUD6 432 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 C12orf56Q8IXR9 622 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 THNSL1Q8IYQ7 743 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 NELFBQ8WX92 580 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 SAMD11Q96NU1 681 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 AGPAT3Q9NRZ7 376 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 FANCLQ9NW38 375 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 SNTG2Q9NY99 539 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 INPP5FQ9Y2H2 1132 aa14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-220ENST00000581737 ARL5CA6NH57 179 aa14.63□□□□□ -0.07
CSNK1D-220ENST00000581737 PPP1R3GB7ZBB8 358 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms