RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 RTP2Q5QGT7 225 aa21.3■■□□□ 1
SREBF1-220ENST00000581707 ATAT1Q5SQI0 421 aa21.3■■□□□ 1
SREBF1-220ENST00000581707 DDX27Q96GQ7 796 aaKnown RBP21.3■■□□□ 1
SREBF1-220ENST00000581707 SFXN1Q9H9B4 322 aa21.3■■□□□ 1
SREBF1-220ENST00000581707 PLXNA3P51805 1871 aa21.3■■□□□ 1
SREBF1-220ENST00000581707 MEFVO15553 781 aaPredicted RBP21.29■■□□□ 1
SREBF1-220ENST00000581707 DCXO43602 365 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 CLTAP09496 248 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 WEE2P0C1S8 567 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 SOX4Q06945 474 aaPredicted RBP21.29■■□□□ 1
SREBF1-220ENST00000581707 PKP1Q13835 747 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 ZC2HC1CQ53FD0 456 aaPredicted RBP21.29■■□□□ 1
SREBF1-220ENST00000581707 ELMSAN1Q6PJG2 1045 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 PRSS55Q6UWB4 352 aaPredicted RBP21.29■■□□□ 1
SREBF1-220ENST00000581707 TMC5Q6UXY8 1006 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 SFR1Q86XK3 245 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 PALB2Q86YC2 1186 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 PDILTQ8N807 584 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 DNAJC19Q96DA6 116 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 ST6GALNAC4Q9H4F1 302 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 POMKQ9H5K3 350 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 MAN1C1Q9NR34 630 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 DPP7Q9UHL4 492 aa21.29■■□□□ 1
SREBF1-220ENST00000581707 CUTAO60888 179 aa21.28■■□□□ 1
SREBF1-220ENST00000581707 C1RP00736 705 aa21.28■■□□□ 1
SREBF1-220ENST00000581707 RPL17P18621 184 aaKnown RBP21.28■■□□□ 1
SREBF1-220ENST00000581707 IGFBP6P24592 240 aaPredicted RBP21.28■■□□□ 1
SREBF1-220ENST00000581707 KYAT1Q16773 422 aa21.28■■□□□ 1
SREBF1-220ENST00000581707 ATL3Q6DD88 541 aa21.28■■□□□ 1
SREBF1-220ENST00000581707 CD300LGQ6UXG3 332 aa21.28■■□□□ 1
SREBF1-220ENST00000581707 ZNF720Q7Z2F6 126 aa21.28■■□□□ 1
SREBF1-220ENST00000581707 MAP4K3Q8IVH8 894 aa21.28■■□□□ 1
SREBF1-220ENST00000581707 GLYCTKQ8IVS8 523 aa21.28■■□□□ 1
SREBF1-220ENST00000581707 PIK3R5Q8WYR1 880 aa21.28■■□□□ 1
SREBF1-220ENST00000581707 C18orf25Q96B23 403 aaPredicted RBP21.28■■□□□ 1
SREBF1-220ENST00000581707 PLEKHA5Q9HAU0 1116 aa21.28■■□□□ 1
SREBF1-220ENST00000581707 SEL1LQ9UBV2 794 aa21.28■■□□□ 1
SREBF1-220ENST00000581707 MUTYHQ9UIF7 546 aa21.28■■□□□ 1
SREBF1-220ENST00000581707 MTCL1Q9Y4B5 1905 aaKnown RBP21.27■■□□□ 1
SREBF1-220ENST00000581707 PDCD11Q14690 1871 aaKnown RBP21.27■■□□□ 1
SREBF1-220ENST00000581707 OGTO15294 1046 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 TRAPPC3O43617 180 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 SPATA31D3P0C874 917 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 CXCL8P10145 99 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 GAP43P17677 238 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 TMEM31Q5JXX7 168 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 PDXDC1Q6P996 788 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.27■■□□□ 1
SREBF1-220ENST00000581707 SPATA31D4Q6ZUB0 917 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 GPR149Q86SP6 731 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 LNX1Q8TBB1 728 aaPredicted RBP21.27■■□□□ 1
SREBF1-220ENST00000581707 KCNG4Q8TDN1 519 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 TSHZ2Q9NRE2 1034 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 NR2E1Q9Y466 385 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 VWA8A3KMH1 1905 aa21.27■■□□□ 1
SREBF1-220ENST00000581707 A0A0B4J269 797 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 PODXLO00592 558 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 TGM5O43548 720 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 GPR37L1O60883 481 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 MYBP10242 640 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 IDEP14735 1019 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 FGFR3P22607 806 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 SP100P23497 879 aaPredicted RBP21.26■□□□□ 0.99
SREBF1-220ENST00000581707 RPL9P32969 192 aaKnown RBP21.26■□□□□ 0.99
SREBF1-220ENST00000581707 TNFSF9P41273 254 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 PSMD5Q16401 504 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 HERC4Q5GLZ8 1057 aaPredicted RBP21.26■□□□□ 0.99
SREBF1-220ENST00000581707 SLC39A4Q6P5W5 647 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 LILRA6Q6PI73 481 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 C3orf58Q8NDZ4 430 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 CMASQ8NFW8 434 aaPredicted RBP21.26■□□□□ 0.99
SREBF1-220ENST00000581707 HDAC7Q8WUI4 952 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 CLSTN3Q9BQT9 956 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 MSTO1Q9BUK6 570 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 PLEKHA4Q9H4M7 779 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 MRPL44Q9H9J2 332 aaKnown RBP21.26■□□□□ 0.99
SREBF1-220ENST00000581707 CFAP45Q9UL16 551 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 TRIOO75962 3097 aa21.26■□□□□ 0.99
SREBF1-220ENST00000581707 TTC26A0AVF1 554 aa21.25■□□□□ 0.99
SREBF1-220ENST00000581707 FAM86C2PA6NEL3 165 aa21.25■□□□□ 0.99
SREBF1-220ENST00000581707 ANKRD63C9JTQ0 380 aa21.25■□□□□ 0.99
SREBF1-220ENST00000581707 FAM189A1O60320 539 aa21.25■□□□□ 0.99
SREBF1-220ENST00000581707 BRCC3P46736 316 aa21.25■□□□□ 0.99
SREBF1-220ENST00000581707 ZBTB41Q5SVQ8 909 aa21.25■□□□□ 0.99
SREBF1-220ENST00000581707 SHC4Q6S5L8 630 aa21.25■□□□□ 0.99
SREBF1-220ENST00000581707 C15orf39Q6ZRI6 1047 aa21.25■□□□□ 0.99
SREBF1-220ENST00000581707 FEZF2Q8TBJ5 459 aa21.25■□□□□ 0.99
SREBF1-220ENST00000581707 HVCN1Q96D96 273 aa21.25■□□□□ 0.99
SREBF1-220ENST00000581707 RPF1Q9H9Y2 349 aaKnown RBP21.25■□□□□ 0.99
SREBF1-220ENST00000581707 C11orf16Q9NQ32 467 aa21.25■□□□□ 0.99
SREBF1-220ENST00000581707 TBC1D7Q9P0N9 293 aa21.25■□□□□ 0.99
SREBF1-220ENST00000581707 CCDC195A0A1B0GUA6 201 aa21.24■□□□□ 0.99
SREBF1-220ENST00000581707 I3L4J1 428 aa21.24■□□□□ 0.99
SREBF1-220ENST00000581707 PPP1R37O75864 691 aa21.24■□□□□ 0.99
SREBF1-220ENST00000581707 DNM1Q05193 864 aaKnown RBP21.24■□□□□ 0.99
SREBF1-220ENST00000581707 PPP2R3AQ06190 1150 aa21.24■□□□□ 0.99
SREBF1-220ENST00000581707 SPAG1Q07617 926 aa21.24■□□□□ 0.99
SREBF1-220ENST00000581707 ENOX2Q16206 610 aaKnown RBP21.24■□□□□ 0.99
SREBF1-220ENST00000581707 AXDND1Q5T1B0 1012 aaPredicted RBP21.24■□□□□ 0.99
SREBF1-220ENST00000581707 SLFN12LQ6IEE8 588 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms