RNA–Protein interactions for RNA: ENST00000581679.1

NDEL1-211, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-211ENST00000581679 CTAGE1Q96RT6 745 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 DESI2Q9BSY9 194 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 ALG1Q9BT22 464 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 C11orf84Q9BUA3 381 aaPredicted RBP4.23□□□□□ -1.73
NDEL1-211ENST00000581679 EPC1Q9H2F5 836 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 SMOC1Q9H4F8 434 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 MRPL44Q9H9J2 332 aaKnown RBP4.23□□□□□ -1.73
NDEL1-211ENST00000581679 PCDH18Q9HCL0 1135 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 GEMIN8Q9NWZ8 242 aaKnown RBP4.23□□□□□ -1.73
NDEL1-211ENST00000581679 DTLQ9NZJ0 730 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 MYOTQ9UBF9 498 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 ASH2LQ9UBL3 628 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 MAN1B1Q9UKM7 699 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 NFE2L3Q9Y4A8 694 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 TRAF6Q9Y4K3 522 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 C4AP0C0L4 1744 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 C4BP0C0L5 1744 aa4.23□□□□□ -1.73
NDEL1-211ENST00000581679 C5P01031 1676 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 RGPD2P0DJD1 1756 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 NWD2Q9ULI1 1742 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 A0A0G2JLW4 131 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 TARSL2A2RTX5 802 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 CTAGE15A4D2H0 777 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 OTOL1A6NHN0 477 aaPredicted RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 EIF3CLB5ME19 914 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 EYA2O00167 538 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 SH2B2O14492 632 aaPredicted RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 FOXP2O15409 715 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 PPFIA4O75335 1185 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 FGAP02671 866 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 LRG1P02750 347 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 SOD2P04179 222 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 SNRPA1P09661 255 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 IFIT1P09914 478 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 CTAGE8P0CG41 777 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 THBS2P35442 1172 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 PBX1P40424 430 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 STAT5AP42229 794 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 METAP2P50579 478 aaKnown RBP eCLIP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 GTF2A1P52655 376 aaPredicted RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 GYS2P54840 703 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 EIF5P55010 431 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 ADKP55263 362 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 ITGA1P56199 1179 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 VSNL1P62760 191 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 TRDNQ13061 729 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 SMAD4Q13485 552 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 TRIM29Q14134 588 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 CASP8Q14790 479 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 SAFBQ15424 915 aaKnown RBP eCLIP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 MAP9Q49MG5 647 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 ZNF569Q5MCW4 686 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 PRR31Q5SQ13 230 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 SPATA1Q5VX52 437 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 TTLL5Q6EMB2 1281 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 ISM2Q6H9L7 571 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 WDR93Q6P2C0 686 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 LMBR1LQ6UX01 489 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 DPH6Q7L8W6 267 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 APTXQ7Z2E3 356 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 CTAGE6Q86UF2 777 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 ZC3H18Q86VM9 953 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 SGMS1Q86VZ5 419 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 NOSTRINQ8IVI9 506 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 SUGP1Q8IWZ8 645 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 CTAGE4Q8IX94 777 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 EFCAB13Q8IY85 973 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 CARFQ8N187 725 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 KYQ8NBH2 561 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 TTLL11Q8NHH1 800 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 PLBD2Q8NHP8 589 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 UHMK1Q8TAS1 419 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 SPATA20Q8TB22 786 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 WASF1Q92558 559 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 APPBP2Q92624 585 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 PTPRN2Q92932 1015 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 LRRC59Q96AG4 307 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 NEUROD6Q96NK8 337 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 CLIC6Q96NY7 704 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 SRPK1Q96SB4 655 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 PNKPQ96T60 521 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 EIF3CQ99613 913 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 CDC6Q99741 560 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 NAPGQ99747 312 aaPredicted RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 DHRS4Q9BTZ2 278 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 TEX13AQ9BXU3 409 aaPredicted RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 PDGFDQ9GZP0 370 aaPredicted RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 IPPKQ9H8X2 491 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 SLC52A2Q9HAB3 445 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 NGRNQ9NPE2 291 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 HSPBP1Q9NZL4 362 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 ADD3Q9UEY8 706 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 WASF3Q9UPY6 502 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 AFDNP55196 1824 aaKnown RBP4.22□□□□□ -1.73
NDEL1-211ENST00000581679 NID2Q14112 1375 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 SCN11AQ9UI33 1791 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 ARFGEF2Q9Y6D5 1785 aa4.22□□□□□ -1.73
NDEL1-211ENST00000581679 ATRNO75882 1429 aa4.21□□□□□ -1.73
NDEL1-211ENST00000581679 A0A087WUV0 522 aaPredicted RBP4.21□□□□□ -1.74
NDEL1-211ENST00000581679 KRIT1O00522 736 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms