RNA–Protein interactions for RNA: ENST00000581583.1

RTTN-207, Transcript of rotatin, humanhuman

TSL 2

Gene RTTN, Length 2,355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-207ENST00000581583 EFCAB13Q8IY85 973 aa12.92□□□□□ -0.34
RTTN-207ENST00000581583 ZC3H15Q8WU90 426 aaKnown RBP12.92□□□□□ -0.34
RTTN-207ENST00000581583 CLMNQ96JQ2 1002 aa12.92□□□□□ -0.34
RTTN-207ENST00000581583 GPR20Q99678 358 aa12.92□□□□□ -0.34
RTTN-207ENST00000581583 CALCOCO1Q9P1Z2 691 aa12.92□□□□□ -0.34
RTTN-207ENST00000581583 ANKFY1Q9P2R3 1169 aa12.92□□□□□ -0.34
RTTN-207ENST00000581583 CNOT8Q9UFF9 292 aaKnown RBP12.92□□□□□ -0.34
RTTN-207ENST00000581583 CNTN6Q9UQ52 1028 aa12.92□□□□□ -0.34
RTTN-207ENST00000581583 CNTNAP2Q9UHC6 1331 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 A6NNZ2 444 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 DAPK3O43293 454 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 ATMINO43313 823 aaPredicted RBP12.91□□□□□ -0.34
RTTN-207ENST00000581583 SPOPO43791 374 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 MSCO60682 206 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 TOM1L1O75674 476 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 ACO1P21399 889 aaKnown RBP12.91□□□□□ -0.34
RTTN-207ENST00000581583 CHRNA3P32297 505 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 SLC26A2P50443 739 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 CUL2Q13617 745 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 KCTD2Q14681 263 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 ZSCAN26Q16670 478 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 TUBB8Q3ZCM7 444 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 SEL1L2Q5TEA6 688 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 LMBRD2Q68DH5 695 aaPredicted RBP12.91□□□□□ -0.34
RTTN-207ENST00000581583 SMYD5Q6GMV2 418 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 PPP1R2P3Q6NXS1 205 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 LRIG3Q6UXM1 1119 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 TRIM72Q6ZMU5 477 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 MCOLN2Q8IZK6 566 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 GLG1Q92896 1179 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 JPH2Q9BR39 696 aaPredicted RBP12.91□□□□□ -0.34
RTTN-207ENST00000581583 ERP44Q9BS26 406 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 PLVAPQ9BX97 442 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 MRPL4Q9BYD3 311 aaKnown RBP12.91□□□□□ -0.34
RTTN-207ENST00000581583 CHORDC1Q9UHD1 332 aaPredicted RBP12.91□□□□□ -0.34
RTTN-207ENST00000581583 PTPRJQ12913 1337 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 IGKV6-21A0A0C4DH24 114 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 FAM170AA1A519 330 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 TMEM110-MUSTN1A8MSY1 372 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 NOP56O00567 594 aaKnown RBP12.91□□□□□ -0.34
RTTN-207ENST00000581583 CYP1A1P04798 512 aaPredicted RBP12.91□□□□□ -0.34
RTTN-207ENST00000581583 OSBPP22059 807 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 MTMR3Q13615 1198 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 CDCA2Q69YH5 1023 aaPredicted RBP12.91□□□□□ -0.34
RTTN-207ENST00000581583 USP50Q70EL3 339 aaPredicted RBP12.91□□□□□ -0.34
RTTN-207ENST00000581583 EEPD1Q7L9B9 569 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 DDX42Q86XP3 938 aaKnown RBP eCLIP12.91□□□□□ -0.34
RTTN-207ENST00000581583 ATP8B4Q8TF62 1192 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 FGD4Q96M96 766 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 CELF4Q9BZC1 486 aaKnown RBP12.91□□□□□ -0.34
RTTN-207ENST00000581583 CCDC113Q9H0I3 377 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 MROH8Q9H579 483 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 SPON1Q9HCB6 807 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 TXNRD2Q9NNW7 524 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 PCYOX1Q9UHG3 505 aa12.91□□□□□ -0.34
RTTN-207ENST00000581583 SHOX2O60902 331 aaPredicted RBP12.9□□□□□ -0.34
RTTN-207ENST00000581583 PHF2O75151 1096 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 ARIH2O95376 493 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 KRT14P02533 472 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 EDN1P05305 212 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 RWDD2BP57060 319 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 CENPCQ03188 943 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 DRP2Q13474 957 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 MOGSQ13724 837 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 HSDL1Q3SXM5 330 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 NAA35Q5VZE5 725 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 DUPD1Q68J44 220 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 BRSK2Q8IWQ3 736 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 ELMO3Q96BJ8 720 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 CDCA5Q96FF9 252 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 VCPIP1Q96JH7 1222 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 RUNDC3BQ96NL0 473 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 MTUS1Q9ULD2 1270 aa12.9□□□□□ -0.34
RTTN-207ENST00000581583 PODXLO00592 558 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 FAM189A1O60320 539 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 PGK2P07205 417 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 CLTAP09496 248 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 PYGMP11217 842 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 HSD17B3P37058 310 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 SLC1A1P43005 524 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 NSFP46459 744 aaKnown RBP12.89□□□□□ -0.35
RTTN-207ENST00000581583 MARCKSL1P49006 195 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 HNRNPH2P55795 449 aaKnown RBP12.89□□□□□ -0.35
RTTN-207ENST00000581583 LAMTOR4Q0VGL1 99 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 MAPK6Q16659 721 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 CYP1B1Q16678 543 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 Q3C1V9 767 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 TTMPQ5BVD1 217 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 SPDYCQ5MJ68 293 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 ZBTB41Q5SVQ8 909 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 EMC10Q5UCC4 262 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 CCDC62Q6P9F0 684 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 WDR49Q8IV35 697 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 ZBTB8OSQ8IWT0 167 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 PRELID2Q8N945 189 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 ARL8AQ96BM9 186 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 MMP19Q99542 508 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 IMPG2Q9BZV3 1241 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 C2orf40Q9H1Z8 148 aa12.89□□□□□ -0.35
RTTN-207ENST00000581583 APOBEC3GQ9HC16 384 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms