RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 RNF19AQ9NV58 838 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 MIOSQ9NXC5 875 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 LRFN2Q9ULH4 789 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 C2CD2Q9Y426 696 aa9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TTC3P53804 2025 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ARL5CA6NH57 179 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 LGALS16A8MUM7 142 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TULP1O00294 542 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 PTGESO14684 152 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 HOXA2O43364 376 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 XPOTO43592 962 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 N4BP1O75113 896 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TNNC2P02585 160 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CYP3A5P20815 502 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 GCLMP48507 274 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 FMO5P49326 533 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 WDR5P61964 334 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TMEM132DQ14C87 1099 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 FKBP15Q5T1M5 1219 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 KRT39Q6A163 491 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 C15orf39Q6ZRI6 1047 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 SV2AQ7L0J3 742 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 OTOP2Q7RTS6 562 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TRAPPC11Q7Z392 1133 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 EFCAB13Q8IY85 973 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 OR5B17Q8NGF7 314 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 KIF12Q96FN5 646 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ANKRD36BP1Q96IX9 119 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ZMAT2Q96NC0 199 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.91□□□□□ -0.829e-16■□□□□ 9
CDK5RAP3-220ENST00000581160 TMEM117Q9H0C3 514 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TMEM8AQ9HCN3 771 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 IFNKQ9P0W0 207 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 KANSL3Q9P2N6 904 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 UBQLN1Q9UMX0 589 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 COQ4Q9Y3A0 265 aa9.91□□□□□ -0.82
CDK5RAP3-220ENST00000581160 PTPRJQ12913 1337 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 GTPBP10A4D1E9 387 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TEX33O43247 280 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 DGKIO75912 1065 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TPM3P06753 285 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 THP07101 528 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 NFICP08651 508 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TMEM191BP0C7N4 346 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 FGFR1P11362 822 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 IBSPP21815 317 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 MLH1P40692 756 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 KCNJ6P48051 423 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 AFF1P51825 1210 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TFAMQ00059 246 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 PLCB2Q00722 1185 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 UBXN1Q04323 297 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CETN1Q12798 172 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ZACNQ401N2 412 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CBWD6Q4V339 395 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 NOMO2Q5JPE7 1267 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CBWD3Q5JTY5 395 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CLLU1OSQ5K130 101 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CBWD5Q5RIA9 395 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 LMBRD2Q68DH5 695 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 GLB1LQ6UWU2 654 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 EHBP1Q8NDI1 1231 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 BEST2Q8NFU1 509 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 PHOSPHO2Q8TCD6 241 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 HELQQ8TDG4 1101 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ZFP42Q96MM3 310 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CASD1Q96PB1 797 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 PPP1R10Q96QC0 940 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 RPS6KC1Q96S38 1066 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 TRIM5Q9C035 493 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 XPO4Q9C0E2 1151 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 MMRN2Q9H8L6 949 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 SLC38A7Q9NVC3 462 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 DPP3Q9NY33 737 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 PCDH10Q9P2E7 1040 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 CITO14578 2027 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 MICAL3Q7RTP6 2002 aa9.9□□□□□ -0.82
CDK5RAP3-220ENST00000581160 ANK1P16157 1881 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 LTBP2Q14767 1821 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 TRIP11Q15643 1979 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 A0A1W2PQC6 194 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 PES1O00541 588 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 PHACTR2O75167 634 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 UPP2O95045 317 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 VNN1O95497 513 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 CST3P01034 146 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 POMCP01189 267 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 LRPAP1P30533 357 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 MAGEA10P43363 369 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 MXI1P50539 228 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 SCNN1GP51170 649 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ZNF75DP51815 510 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 DEFB103AP81534 67 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 RBP5P82980 135 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 KCNMA1Q12791 1236 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 GRIK3Q13003 919 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 NAB2Q15742 525 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 EPC2Q52LR7 807 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 RASIP1Q5U651 963 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms