RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 TLR9Q9NR96 1032 aa13.23□□□□□ -0.29
CCDC84-209ENST00000580556 ANKFY1Q9P2R3 1169 aa13.23□□□□□ -0.29
CCDC84-209ENST00000580556 RWDD2AQ9UIY3 292 aa13.23□□□□□ -0.29
CCDC84-209ENST00000580556 DMDP11532 3685 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 C9IYK1 514 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 OGTO15294 1046 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 FAM189A1O60320 539 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 PDGFBP01127 241 aaPredicted RBP13.22□□□□□ -0.29
CCDC84-209ENST00000580556 RB1P06400 928 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 RPL13P26373 211 aaKnown RBP13.22□□□□□ -0.29
CCDC84-209ENST00000580556 AVPR2P30518 371 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 TTI2Q6NXR4 508 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 ASCL5Q7RTU5 278 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 MRPL10Q7Z7H8 261 aaKnown RBP13.22□□□□□ -0.29
CCDC84-209ENST00000580556 HACE1Q8IYU2 909 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 NELFBQ8WX92 580 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 POMGNT1Q8WZA1 660 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 ASIC4Q96FT7 647 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 BPIFA3Q9BQP9 254 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 TCHPQ9BT92 498 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 ANP32EQ9BTT0 268 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 MSTO1Q9BUK6 570 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 EIF2AQ9BY44 585 aaKnown RBP13.22□□□□□ -0.29
CCDC84-209ENST00000580556 TRIM6Q9C030 488 aaPredicted RBP13.22□□□□□ -0.29
CCDC84-209ENST00000580556 NAT10Q9H0A0 1025 aaKnown RBP13.22□□□□□ -0.29
CCDC84-209ENST00000580556 IKZF4Q9H2S9 585 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 ELAC1Q9H777 363 aaKnown RBP13.22□□□□□ -0.29
CCDC84-209ENST00000580556 RC3H2Q9HBD1 1191 aaKnown RBP13.22□□□□□ -0.29
CCDC84-209ENST00000580556 KIAA1586Q9HCI6 787 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 FAM105AQ9NUU6 356 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 DMAC2Q9NW81 257 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 USP20Q9Y2K6 914 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 PCDHB2Q9Y5E7 798 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 PCDHGC5Q9Y5F6 944 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 CACNA1HO95180 2353 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 SPTBN4Q9H254 2564 aa13.22□□□□□ -0.29
CCDC84-209ENST00000580556 DCHS1Q96JQ0 3298 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 KIAA1671Q9BY89 1806 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 PTPRZ1P23471 2315 aaPredicted RBP13.21□□□□□ -0.29
CCDC84-209ENST00000580556 TISP43B9A030 160 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 ENPP3O14638 875 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 NPTXRO95502 500 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 EOMESO95936 686 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 LDHAP00338 332 aaKnown RBP13.21□□□□□ -0.29
CCDC84-209ENST00000580556 NR3C1P04150 777 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 GRM5P41594 1212 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 ZNF445P59923 1031 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 RBM10P98175 930 aaKnown RBP13.21□□□□□ -0.29
CCDC84-209ENST00000580556 CBX2Q14781 532 aaPredicted RBP13.21□□□□□ -0.29
CCDC84-209ENST00000580556 KLHL10Q6JEL2 608 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 ARMCX5Q6P1M9 558 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 ZNF598Q86UK7 904 aaKnown RBP13.21□□□□□ -0.29
CCDC84-209ENST00000580556 RTN4RL1Q86UN2 441 aaPredicted RBP13.21□□□□□ -0.29
CCDC84-209ENST00000580556 CDR2LQ86X02 465 aaPredicted RBP13.21□□□□□ -0.29
CCDC84-209ENST00000580556 CRIPAKQ8N1N5 446 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 SMRP1Q8NCR6 262 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 PGBD4Q96DM1 585 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 ZBTB45Q96K62 511 aaPredicted RBP13.21□□□□□ -0.29
CCDC84-209ENST00000580556 RPGRIP1Q96KN7 1286 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 CBWD1Q9BRT8 395 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 HAPLN2Q9GZV7 340 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 TMEM161AQ9NX61 479 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 HSPBP1Q9NZL4 362 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 AGO2Q9UKV8 859 aaKnown RBP13.21□□□□□ -0.29
CCDC84-209ENST00000580556 BARX2Q9UMQ3 279 aaPredicted RBP13.21□□□□□ -0.29
CCDC84-209ENST00000580556 CTNND2Q9UQB3 1225 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 IPPQ9Y573 584 aa13.21□□□□□ -0.29
CCDC84-209ENST00000580556 MAPK13O15264 365 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 EXTL3O43909 919 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 GLP2RO95838 553 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 ATF7P17544 494 aaPredicted RBP13.2□□□□□ -0.3
CCDC84-209ENST00000580556 NR2F2P24468 414 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC84-209ENST00000580556 PMS1P54277 932 aaKnown RBP13.2□□□□□ -0.3
CCDC84-209ENST00000580556 FKBP3Q00688 224 aaKnown RBP13.2□□□□□ -0.3
CCDC84-209ENST00000580556 FOXK2Q01167 660 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 SIGLEC14Q08ET2 396 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 ANKRD40Q6AI12 368 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 RBM23Q86U06 439 aaKnown RBP13.2□□□□□ -0.3
CCDC84-209ENST00000580556 ECHDC2Q86YB7 292 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 NPAS4Q8IUM7 802 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 GPD1LQ8N335 351 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 XXYLT1Q8NBI6 393 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 SMG8Q8ND04 991 aaKnown RBP13.2□□□□□ -0.3
CCDC84-209ENST00000580556 CLP1Q92989 425 aaKnown RBP13.2□□□□□ -0.3
CCDC84-209ENST00000580556 MKNK1Q9BUB5 465 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 UBN1Q9NPG3 1134 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 PLAGL2Q9UPG8 496 aa13.2□□□□□ -0.3
CCDC84-209ENST00000580556 USP15Q9Y4E8 981 aaPredicted RBP13.2□□□□□ -0.3
CCDC84-209ENST00000580556 TRIM49BA6NDI0 452 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 INPPL1O15357 1258 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 SLC16A3O15427 465 aaKnown RBP13.19□□□□□ -0.3
CCDC84-209ENST00000580556 HOXA2O43364 376 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 FGFR1OPO95684 399 aaKnown RBP13.19□□□□□ -0.3
CCDC84-209ENST00000580556 ITGB1P05556 798 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 ADRB2P07550 413 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 CLTAP09496 248 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 NRIP1P48552 1158 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 ENPEPQ07075 957 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 BTG3Q14201 252 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms