RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 TMEM161BQ8NDZ6 487 aa15.89■□□□□ 0.13
SMARCE1-216ENST00000580419 PRSS33Q8NF86 280 aa15.89■□□□□ 0.13
SMARCE1-216ENST00000580419 ACAP3Q96P50 834 aa15.89■□□□□ 0.13
SMARCE1-216ENST00000580419 PNMA5Q96PV4 448 aa15.89■□□□□ 0.13
SMARCE1-216ENST00000580419 AVENQ9NQS1 362 aaPredicted RBP15.89■□□□□ 0.13
SMARCE1-216ENST00000580419 SMC3Q9UQE7 1217 aa15.89■□□□□ 0.13
SMARCE1-216ENST00000580419 VPS13AQ96RL7 3174 aa15.89■□□□□ 0.13
SMARCE1-216ENST00000580419 PP2D1A8MPX8 630 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 RFPL2O75678 378 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 MAPTP10636 758 aaKnown RBP15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 PAX3P23760 479 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 LONP1P36776 959 aaKnown RBP15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 ZNF131P52739 623 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 MCL1Q07820 350 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 TCF15Q12870 199 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 STRN3Q13033 797 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 IER5LQ5T953 404 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 LIN9Q5TKA1 542 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 ASTLQ6HA08 431 aaPredicted RBP15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 SLC8B1Q6J4K2 584 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 CD300LGQ6UXG3 332 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 PALB2Q86YC2 1186 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 CDK5RAP3Q96JB5 506 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 SNX27Q96L92 541 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 OXCT2Q9BYC2 517 aaPredicted RBP15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 KCNH3Q9ULD8 1083 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 GDAQ9Y2T3 454 aa15.88■□□□□ 0.13
SMARCE1-216ENST00000580419 ZFHX2Q9C0A1 2572 aaPredicted RBP15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 NOTCH4Q99466 2003 aa15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 PROB1E7EW31 1015 aa15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 GALR2O43603 387 aaPredicted RBP15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 N4BP1O75113 896 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 XYLBO75191 536 aa15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 CD2BP2O95400 341 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 PIGRP01833 764 aa15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 ASGR2P07307 311 aa15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 ADRB2P07550 413 aa15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 PLA2G4BP0C869 781 aa15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 LAMP2P13473 410 aa15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 SP100P23497 879 aaPredicted RBP15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 CDC25AP30304 524 aa15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 MRE11P49959 708 aa15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 NCKAP1LP55160 1127 aa15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 POU5F1Q01860 360 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 NOLC1Q14978 699 aaKnown RBP eCLIP15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 LARP1BQ659C4 914 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 RTP3Q9BQQ7 232 aa15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 TARS2Q9BW92 718 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-216ENST00000580419 VWA3AA6NCI4 1184 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 CLDN3O15551 220 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 TBC1D4O60343 1298 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 SRFP11831 508 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 CYP3A5P20815 502 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 UBA7P41226 1012 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 CLCNKBP51801 687 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 VCPP55072 806 aaKnown RBP15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 MRPL58Q14197 206 aaKnown RBP15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 PRSS55Q6UWB4 352 aaPredicted RBP15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 ZNF461Q8TAF7 563 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 CALML4Q96GE6 196 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 B3GALT6Q96L58 329 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 CCSER1Q9C0I3 900 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 CXCL16Q9H2A7 254 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 PIDD1Q9HB75 910 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 SLC2A4RGQ9NR83 387 aa15.86■□□□□ 0.13
SMARCE1-216ENST00000580419 MYO15AQ9UKN7 3530 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 ARHGEF37A1IGU5 675 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 SLC16A4O15374 487 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 MICAL2O94851 1124 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 ABLIM3O94929 683 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 C8AP07357 584 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 CLTAP09496 248 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 LIG1P18858 919 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 AOC1P19801 751 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 ARSHQ5FYA8 562 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 PPM1LQ5SGD2 360 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 TPGS2Q68CL5 300 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 CEP57Q86XR8 500 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 SLC44A3Q8N4M1 653 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 CEP120Q8N960 986 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 INTS4Q96HW7 963 aaKnown RBP15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 SUSD3Q96L08 255 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 ZMAT2Q96NC0 199 aaKnown RBP15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 MYADMQ96S97 322 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 TCHPQ9BT92 498 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 ST6GALNAC4Q9H4F1 302 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 CDH7Q9ULB5 785 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 USP20Q9Y2K6 914 aa15.85■□□□□ 0.13
SMARCE1-216ENST00000580419 CFAP54Q96N23 3096 aa15.84■□□□□ 0.13
SMARCE1-216ENST00000580419 TTC26A0AVF1 554 aa15.84■□□□□ 0.13
SMARCE1-216ENST00000580419 H7C4K7 107 aa15.84■□□□□ 0.13
SMARCE1-216ENST00000580419 RPL17P18621 184 aaKnown RBP15.84■□□□□ 0.13
SMARCE1-216ENST00000580419 LRPAP1P30533 357 aa15.84■□□□□ 0.13
SMARCE1-216ENST00000580419 GBP2P32456 591 aaPredicted RBP15.84■□□□□ 0.13
SMARCE1-216ENST00000580419 OR1D2P34982 312 aa15.84■□□□□ 0.13
SMARCE1-216ENST00000580419 SOX4Q06945 474 aaPredicted RBP15.84■□□□□ 0.13
SMARCE1-216ENST00000580419 HTR4Q13639 388 aa15.84■□□□□ 0.13
SMARCE1-216ENST00000580419 ZBTB6Q15916 424 aa15.84■□□□□ 0.13
SMARCE1-216ENST00000580419 SLC10A6Q3KNW5 377 aa15.84■□□□□ 0.13
SMARCE1-216ENST00000580419 AXDND1Q5T1B0 1012 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms