RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 KLK14Q9P0G3 267 aa21.39■■□□□ 1.01
LIMD2-209ENST00000580222 CIZ1Q9ULV3 898 aaPredicted RBP21.39■■□□□ 1.01
LIMD2-209ENST00000580222 ZDHHC9Q9Y397 364 aa21.39■■□□□ 1.01
LIMD2-209ENST00000580222 PCDHB6Q9Y5E3 794 aa21.39■■□□□ 1.01
LIMD2-209ENST00000580222 PSMC5P62195 406 aa21.38■■□□□ 1.01
LIMD2-209ENST00000580222 LAIR1Q6GTX8 287 aa21.38■■□□□ 1.01
LIMD2-209ENST00000580222 TANGO2Q6ICL3 276 aa21.38■■□□□ 1.01
LIMD2-209ENST00000580222 ZNF852Q6ZMS4 543 aa21.38■■□□□ 1.01
LIMD2-209ENST00000580222 PSPC1Q8WXF1 523 aaKnown RBP21.38■■□□□ 1.01
LIMD2-209ENST00000580222 MCRS1Q96EZ8 462 aa21.38■■□□□ 1.01
LIMD2-209ENST00000580222 FAM126AQ9BYI3 521 aaPredicted RBP21.38■■□□□ 1.01
LIMD2-209ENST00000580222 CSRNP2Q9H175 543 aa21.38■■□□□ 1.01
LIMD2-209ENST00000580222 SEMA4GQ9NTN9 838 aa21.38■■□□□ 1.01
LIMD2-209ENST00000580222 NDRG2Q9UN36 371 aaKnown RBP21.38■■□□□ 1.01
LIMD2-209ENST00000580222 ZFYVE26Q68DK2 2539 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 ZBTB39O15060 712 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 NR1I2O75469 434 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 TADA2AO75478 443 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 RETP07949 1114 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 IGFBP6P24592 240 aaPredicted RBP21.37■■□□□ 1.01
LIMD2-209ENST00000580222 DMWDQ09019 674 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 SRSF5Q13243 272 aaKnown RBP21.37■■□□□ 1.01
LIMD2-209ENST00000580222 CALCRLQ16602 461 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 AMHR2Q16671 573 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 SLC5A9Q2M3M2 681 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 FOXD4L6Q3SYB3 417 aaPredicted RBP21.37■■□□□ 1.01
LIMD2-209ENST00000580222 FOXD4L3Q6VB84 417 aaPredicted RBP21.37■■□□□ 1.01
LIMD2-209ENST00000580222 CDR2LQ86X02 465 aaPredicted RBP21.37■■□□□ 1.01
LIMD2-209ENST00000580222 SLC7A14Q8TBB6 771 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 CEP170P1Q96L14 293 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 JPH2Q9BR39 696 aaPredicted RBP21.37■■□□□ 1.01
LIMD2-209ENST00000580222 CXCL16Q9H2A7 254 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.37■■□□□ 1.01
LIMD2-209ENST00000580222 GIT1Q9Y2X7 761 aa21.37■■□□□ 1.01
LIMD2-209ENST00000580222 NCAM2O15394 837 aa21.36■■□□□ 1.01
LIMD2-209ENST00000580222 HRO43593 1189 aa21.36■■□□□ 1.01
LIMD2-209ENST00000580222 BAG4O95429 457 aaKnown RBP21.36■■□□□ 1.01
LIMD2-209ENST00000580222 KCNA4P22459 653 aa21.36■■□□□ 1.01
LIMD2-209ENST00000580222 HOXC13P31276 330 aa21.36■■□□□ 1.01
LIMD2-209ENST00000580222 N4BP2L1Q5TBK1 243 aaPredicted RBP21.36■■□□□ 1.01
LIMD2-209ENST00000580222 LIN9Q5TKA1 542 aa21.36■■□□□ 1.01
LIMD2-209ENST00000580222 PRR23CQ6ZRP0 262 aa21.36■■□□□ 1.01
LIMD2-209ENST00000580222 PRR23BQ6ZRT6 265 aa21.36■■□□□ 1.01
LIMD2-209ENST00000580222 CELF5Q8N6W0 485 aaKnown RBP21.36■■□□□ 1.01
LIMD2-209ENST00000580222 SLC7A3Q8WY07 619 aa21.36■■□□□ 1.01
LIMD2-209ENST00000580222 PIK3R5Q8WYR1 880 aa21.36■■□□□ 1.01
LIMD2-209ENST00000580222 ZNF396Q96N95 335 aaPredicted RBP21.36■■□□□ 1.01
LIMD2-209ENST00000580222 CHRDQ9H2X0 955 aa21.36■■□□□ 1.01
LIMD2-209ENST00000580222 KCNMB3Q9NPA1 279 aa21.36■■□□□ 1.01
LIMD2-209ENST00000580222 CHMP5Q9NZZ3 219 aa21.36■■□□□ 1.01
LIMD2-209ENST00000580222 MTCL1Q9Y4B5 1905 aaKnown RBP21.35■■□□□ 1.01
LIMD2-209ENST00000580222 TBX3O15119 743 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 B4GALT5O43286 388 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 ECI2O75521 394 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 PMLP29590 882 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 HOXA9P31269 272 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 CREMQ03060 361 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 HSP90AA2PQ14568 343 aaPredicted RBP21.35■■□□□ 1.01
LIMD2-209ENST00000580222 PSMD5Q16401 504 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 AXDND1Q5T1B0 1012 aaPredicted RBP21.35■■□□□ 1.01
LIMD2-209ENST00000580222 FAM171A1Q5VUB5 890 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 CEP57Q86XR8 500 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 SLFN12Q8IYM2 578 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 TTPALQ9BTX7 342 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 RAB23Q9ULC3 237 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 ATP6V1DQ9Y5K8 247 aa21.35■■□□□ 1.01
LIMD2-209ENST00000580222 CNOT1A5YKK6 2376 aaKnown RBP21.34■■□□□ 1.01
LIMD2-209ENST00000580222 XYLBO75191 536 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 ERLIN2O94905 339 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 KIF4AO95239 1232 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 OR52Z1P0C646 297 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 ARF4P18085 180 aaPredicted RBP21.34■■□□□ 1.01
LIMD2-209ENST00000580222 FCARP24071 287 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 QARSP47897 775 aaKnown RBP21.34■■□□□ 1.01
LIMD2-209ENST00000580222 PTENP60484 403 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 SATB1Q01826 763 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 GAS6Q14393 721 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 SF3A1Q15459 793 aaKnown RBP21.34■■□□□ 1.01
LIMD2-209ENST00000580222 CSRP2Q16527 193 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 PABPC1LQ4VXU2 614 aaKnown RBP21.34■■□□□ 1.01
LIMD2-209ENST00000580222 NOTUMQ6P988 496 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 MAMSTRQ6ZN01 415 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 FAM20AQ96MK3 541 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 TMEM60Q9H2L4 133 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 ANGPTL2Q9UKU9 493 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 VAV3Q9UKW4 847 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 KCNH3Q9ULD8 1083 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 FAM208BQ5VWN6 2430 aa21.34■■□□□ 1.01
LIMD2-209ENST00000580222 SF3B1O75533 1304 aaKnown RBP eCLIP21.33■■□□□ 1.01
LIMD2-209ENST00000580222 NOTCH4Q99466 2003 aa21.33■■□□□ 1.01
LIMD2-209ENST00000580222 BMP15O95972 392 aa21.33■■□□□ 1.01
LIMD2-209ENST00000580222 CEBPZQ03701 1054 aaKnown RBP21.33■■□□□ 1.01
LIMD2-209ENST00000580222 PTGDRQ13258 359 aa21.33■■□□□ 1.01
LIMD2-209ENST00000580222 GRM2Q14416 872 aa21.33■■□□□ 1.01
LIMD2-209ENST00000580222 EMC2Q15006 297 aa21.33■■□□□ 1.01
LIMD2-209ENST00000580222 CCDC51Q96ER9 411 aa21.33■■□□□ 1.01
LIMD2-209ENST00000580222 USP28Q96RU2 1077 aa21.33■■□□□ 1.01
LIMD2-209ENST00000580222 LMAN1LQ9HAT1 526 aa21.33■■□□□ 1.01
LIMD2-209ENST00000580222 XPNPEP1Q9NQW7 623 aa21.33■■□□□ 1.01
LIMD2-209ENST00000580222 MRPS17Q9Y2R5 130 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms