RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 PFKPQ01813 784 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 TAP1Q03518 808 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 FOXF2Q12947 444 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 LRRC32Q14392 662 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 ACAP2Q15057 778 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 DDB1Q16531 1140 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 FAM133BQ5BKY9 247 aaKnown RBP3.7□□□□□ -1.82
KPNB1-208ENST00000580019 GTF2IRD2BQ6EKJ0 949 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 CYP4F22Q6NT55 531 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 CC2D1AQ6P1N0 951 aaPredicted RBP3.7□□□□□ -1.82
KPNB1-208ENST00000580019 DARS2Q6PI48 645 aaKnown RBP3.7□□□□□ -1.82
KPNB1-208ENST00000580019 CRELD2Q6UXH1 353 aaPredicted RBP3.7□□□□□ -1.82
KPNB1-208ENST00000580019 RSPO2Q6UXX9 243 aaPredicted RBP3.7□□□□□ -1.82
KPNB1-208ENST00000580019 CCDC149Q6ZUS6 474 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 KRT77Q7Z794 578 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 GTF2IRD2Q86UP8 949 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 MIER2Q8N344 545 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 ZNF276Q8N554 614 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 CHST14Q8NCH0 376 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 BEND2Q8NDZ0 799 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 DIO2Q92813 273 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 PPM1MQ96MI6 270 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 ZFYVE21Q9BQ24 234 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 MYLK2Q9H1R3 596 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 NKX2-4Q9H2Z4 354 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 EPB41L1Q9H4G0 881 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 IFT122Q9HBG6 1241 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 PCDHGB3Q9Y5G1 929 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 PCDHGA9Q9Y5G4 932 aaKnown RBP3.7□□□□□ -1.82
KPNB1-208ENST00000580019 PCDHGA8Q9Y5G5 932 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 PCDHGA7Q9Y5G6 932 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 PCDHGA6Q9Y5G7 932 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 PCDHGA3Q9Y5H0 932 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 PCDHGA2Q9Y5H1 932 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 SYNJ1O43426 1573 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 PEG3Q9GZU2 1588 aa3.7□□□□□ -1.82
KPNB1-208ENST00000580019 ABCC10Q5T3U5 1492 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 PMS2P1A4D2B8 440 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 GOLGA8AA7E2F4 631 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 GOLGA8BA8MQT2 603 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 PRSS47A8MTI9 375 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 J3KRW8 73 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 KCNAB3O43448 404 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 HIP1RO75146 1068 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 SCG5P05408 212 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 ECI1P42126 302 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 ELLP55199 621 aaPredicted RBP3.69□□□□□ -1.82
KPNB1-208ENST00000580019 SCAND1P57086 179 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 GPR85P60893 370 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 NUCB1Q02818 461 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 TNFAIP2Q03169 654 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 GRIN1Q05586 938 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 PPFIA1Q13136 1202 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 TERF2Q15554 542 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 ARHGAP44Q17R89 818 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 KIAA0753Q2KHM9 967 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 KLHL22Q53GT1 634 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 ATAT1Q5SQI0 421 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 SLC35F1Q5T1Q4 408 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 BROXQ5VW32 411 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 ABHD17CQ6PCB6 329 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 RINLQ6ZS11 566 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 ANKRD23Q86SG2 305 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 DPP9Q86TI2 863 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 RASSF3Q86WH2 238 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 ANKRD18AQ8IVF6 992 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 SLC41A1Q8IVJ1 513 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 SRRM1Q8IYB3 904 aaKnown RBP3.69□□□□□ -1.82
KPNB1-208ENST00000580019 TMEM145Q8NBT3 493 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 FAM156AQ8NDB6 213 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 SHCBP1Q8NEM2 672 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 FRS2Q8WU20 508 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 SSH1Q8WYL5 1049 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 GCC1Q96CN9 775 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 TEKT5Q96M29 485 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 TTC14Q96N46 770 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 SPATA5L1Q9BVQ7 753 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 ADGRE3Q9BY15 652 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 WDR12Q9GZL7 423 aaKnown RBP3.69□□□□□ -1.82
KPNB1-208ENST00000580019 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.69□□□□□ -1.82
KPNB1-208ENST00000580019 NUP62CLQ9H1M0 184 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 CYP4F11Q9HBI6 524 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 KIAA1586Q9HCI6 787 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 AGO4Q9HCK5 861 aaKnown RBP3.69□□□□□ -1.82
KPNB1-208ENST00000580019 RASSF1Q9NS23 344 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 NOC2LQ9Y3T9 749 aaKnown RBP3.69□□□□□ -1.82
KPNB1-208ENST00000580019 PCDHA8Q9Y5H6 950 aa3.69□□□□□ -1.82
KPNB1-208ENST00000580019 LRRFIP2Q9Y608 721 aaKnown RBP3.69□□□□□ -1.82
KPNB1-208ENST00000580019 PTPDC1A2A3K4 754 aa3.68□□□□□ -1.82
KPNB1-208ENST00000580019 ZNF839A8K0R7 811 aa3.68□□□□□ -1.82
KPNB1-208ENST00000580019 RASA4BC9J798 803 aa3.68□□□□□ -1.82
KPNB1-208ENST00000580019 FAM227AF5H4B4 570 aa3.68□□□□□ -1.82
KPNB1-208ENST00000580019 ARVCFO00192 962 aa3.68□□□□□ -1.82
KPNB1-208ENST00000580019 GOLIM4O00461 696 aa3.68□□□□□ -1.82
KPNB1-208ENST00000580019 RASA4O43374 803 aa3.68□□□□□ -1.82
KPNB1-208ENST00000580019 SOD2P04179 222 aa3.68□□□□□ -1.82
KPNB1-208ENST00000580019 POU2F2P09086 479 aa3.68□□□□□ -1.82
KPNB1-208ENST00000580019 FAHP16930 419 aa3.68□□□□□ -1.82
KPNB1-208ENST00000580019 GRK2P25098 689 aa3.68□□□□□ -1.82
KPNB1-208ENST00000580019 CACNB3P54284 484 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms