RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 METTL14Q9HCE5 456 aaKnown RBP13.16□□□□□ -0.3
IFT20-207ENST00000578547 CNTN3Q9P232 1028 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 PLAGL2Q9UPG8 496 aa13.16□□□□□ -0.3
IFT20-207ENST00000578547 PTPRJQ12913 1337 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 CITO14578 2027 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 ANK1P16157 1881 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.15□□□□□ -0.3
IFT20-207ENST00000578547 SMIM28A0A1B0GU29 152 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.15□□□□□ -0.3
IFT20-207ENST00000578547 LRRIQ3A6PVS8 624 aaPredicted RBP13.15□□□□□ -0.3
IFT20-207ENST00000578547 PTGESO14684 152 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 ATP1A3P13637 1013 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 TNNI1P19237 187 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 CDK11BP21127 795 aaKnown RBP13.15□□□□□ -0.3
IFT20-207ENST00000578547 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.3
IFT20-207ENST00000578547 SURF1Q15526 300 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 TCP11X2Q5H9J9 407 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 ALKAL1Q6UXT8 129 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 USP37Q86T82 979 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 CD302Q8IX05 232 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 EFCAB13Q8IY85 973 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 TMEM130Q8N3G9 435 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 PARD3BQ8TEW8 1205 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 C18orf25Q96B23 403 aaPredicted RBP13.15□□□□□ -0.3
IFT20-207ENST00000578547 BORCS6Q96GS4 357 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 ZMAT2Q96NC0 199 aaKnown RBP13.15□□□□□ -0.3
IFT20-207ENST00000578547 CASD1Q96PB1 797 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 TMEM117Q9H0C3 514 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 RBSNQ9H1K0 784 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 MIOSQ9NXC5 875 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 TUBGCP4Q9UGJ1 667 aa13.15□□□□□ -0.3
IFT20-207ENST00000578547 RANBP2P49792 3224 aaKnown RBP13.14□□□□□ -0.31
IFT20-207ENST00000578547 A0A1W2PPC1 479 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 PES1O00541 588 aaKnown RBP13.14□□□□□ -0.31
IFT20-207ENST00000578547 TLL1O43897 1013 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 TNNC2P02585 160 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 THP07101 528 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 TMEM191BP0C7N4 346 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 PRKCSHP14314 528 aaPredicted RBP13.14□□□□□ -0.31
IFT20-207ENST00000578547 MYOGP15173 224 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 EEF1GP26641 437 aaKnown RBP13.14□□□□□ -0.31
IFT20-207ENST00000578547 GUCY2FP51841 1108 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 HTRA4P83105 476 aaPredicted RBP13.14□□□□□ -0.31
IFT20-207ENST00000578547 POU5F1Q01860 360 aaKnown RBP13.14□□□□□ -0.31
IFT20-207ENST00000578547 GRIK3Q13003 919 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 WDR49Q8IV35 697 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 TRIM59Q8IWR1 403 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 GSTCDQ8NEC7 633 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 ANKRD20A12PQ8NF67 263 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 OR5B17Q8NGF7 314 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 TMC2Q8TDI7 906 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 ZNF689Q96CS4 500 aaPredicted RBP13.14□□□□□ -0.31
IFT20-207ENST00000578547 RAD9AQ99638 391 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 MTMR12Q9C0I1 747 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 HSD3B7Q9H2F3 369 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 ASB7Q9H672 318 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 RC3H2Q9HBD1 1191 aaKnown RBP13.14□□□□□ -0.31
IFT20-207ENST00000578547 TBC1D13Q9NVG8 400 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 TAB2Q9NYJ8 693 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 HCSTQ9UBK5 93 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 CACNG4Q9UBN1 327 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.14□□□□□ -0.31
IFT20-207ENST00000578547 COL4A6Q14031 1691 aa13.14□□□□□ -0.31
IFT20-207ENST00000578547 TRIOBPQ9H2D6 2365 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 CLSTN1O94985 981 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 KCNE1P15382 129 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 ZNF18P17022 549 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 PBX2P40425 430 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 GCLMP48507 274 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 MARSP56192 900 aaKnown RBP13.13□□□□□ -0.31
IFT20-207ENST00000578547 SOX4Q06945 474 aaPredicted RBP13.13□□□□□ -0.31
IFT20-207ENST00000578547 BIRC3Q13489 604 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 BTG3Q14201 252 aaPredicted RBP13.13□□□□□ -0.31
IFT20-207ENST00000578547 KRT31Q15323 416 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 XKR4Q5GH76 650 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 C1orf220Q5T0J3 134 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 LRRC43Q8N309 656 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 BEST2Q8NFU1 509 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 SLC35C1Q96A29 364 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 ANKRD36BP1Q96IX9 119 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 FAM193BQ96PV7 902 aaPredicted RBP13.13□□□□□ -0.31
IFT20-207ENST00000578547 PPP1R10Q96QC0 940 aaKnown RBP13.13□□□□□ -0.31
IFT20-207ENST00000578547 TUBGCP2Q9BSJ2 902 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 MRPL9Q9BYD2 267 aaKnown RBP13.13□□□□□ -0.31
IFT20-207ENST00000578547 GOLGA2P5Q9HBQ8 144 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 SLC38A7Q9NVC3 462 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 INTS13Q9NVM9 706 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 UBQLN1Q9UMX0 589 aaKnown RBP13.13□□□□□ -0.31
IFT20-207ENST00000578547 DERAQ9Y315 318 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 C2CD2Q9Y426 696 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 INSL6Q9Y581 213 aa13.13□□□□□ -0.31
IFT20-207ENST00000578547 PDCD11Q14690 1871 aaKnown RBP13.12□□□□□ -0.31
IFT20-207ENST00000578547 LCHNA4D1U4 455 aa13.12□□□□□ -0.31
IFT20-207ENST00000578547 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
IFT20-207ENST00000578547 INPPL1O15357 1258 aa13.12□□□□□ -0.31
IFT20-207ENST00000578547 XPOTO43592 962 aaKnown RBP13.12□□□□□ -0.31
IFT20-207ENST00000578547 STX10O60499 249 aa13.12□□□□□ -0.31
IFT20-207ENST00000578547 ZC3H11AO75152 810 aaKnown RBP eCLIP13.12□□□□□ -0.31
IFT20-207ENST00000578547 PHACTR2O75167 634 aa13.12□□□□□ -0.31
IFT20-207ENST00000578547 TPM2P07951 284 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms