RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 TMEM161BQ8NDZ6 487 aa15.28■□□□□ 0.04
PSMD11-207ENST00000578397 LNX1Q8TBB1 728 aaPredicted RBP15.28■□□□□ 0.04
PSMD11-207ENST00000578397 ZNF707Q96C28 371 aaPredicted RBP15.28■□□□□ 0.04
PSMD11-207ENST00000578397 CALML4Q96GE6 196 aa15.28■□□□□ 0.04
PSMD11-207ENST00000578397 DDX27Q96GQ7 796 aaKnown RBP15.28■□□□□ 0.04
PSMD11-207ENST00000578397 PLIN2Q99541 437 aa15.28■□□□□ 0.04
PSMD11-207ENST00000578397 PRKD2Q9BZL6 878 aa15.28■□□□□ 0.04
PSMD11-207ENST00000578397 SLC38A7Q9NVC3 462 aa15.28■□□□□ 0.04
PSMD11-207ENST00000578397 LARSQ9P2J5 1176 aaKnown RBP15.28■□□□□ 0.04
PSMD11-207ENST00000578397 CLUHO75153 1309 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 SMIM28A0A1B0GU29 152 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 TOM1L1O75674 476 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 ZMYND10O75800 440 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 SPATA31D3P0C874 917 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 PDCP20941 246 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 SCP2P22307 547 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 LONP1P36776 959 aaKnown RBP15.27■□□□□ 0.04
PSMD11-207ENST00000578397 UPP1Q16831 310 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 SPATA31D4Q6ZUB0 917 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 GLYCTKQ8IVS8 523 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 KCNN1Q92952 543 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 ACAP3Q96P50 834 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 CLSTN3Q9BQT9 956 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 PIDD1Q9HB75 910 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 IGSF9Q9P2J2 1179 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 ODF2LQ9ULJ1 636 aa15.27■□□□□ 0.04
PSMD11-207ENST00000578397 ABLIM1O14639 778 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 MYBP10242 640 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 MAPTP10636 758 aaKnown RBP15.26■□□□□ 0.03
PSMD11-207ENST00000578397 KCNE1P15382 129 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 FGFR3P22607 806 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 CLCNKBP51801 687 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 OSTNP61366 133 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 NHLH1Q02575 133 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 RAD51AP2Q09MP3 1159 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 TDGQ13569 410 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 ARSHQ5FYA8 562 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 ZPBP2Q6X784 338 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 SNX27Q96L92 541 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 EPS15L1Q9UBC2 864 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 FBXW11Q9UKB1 542 aa15.26■□□□□ 0.03
PSMD11-207ENST00000578397 HNRNPA1P09651 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
PSMD11-207ENST00000578397 AVPR2P30518 371 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 HOXA9P31269 272 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 GBP2P32456 591 aaPredicted RBP15.25■□□□□ 0.03
PSMD11-207ENST00000578397 RPL9P32969 192 aaKnown RBP15.25■□□□□ 0.03
PSMD11-207ENST00000578397 PTPN5P54829 565 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 RAB33AQ14088 237 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 NOLC1Q14978 699 aaKnown RBP eCLIP15.25■□□□□ 0.03
PSMD11-207ENST00000578397 LIN9Q5TKA1 542 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 CD300LGQ6UXG3 332 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 ANKS3Q6ZW76 656 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 RTL10Q7L3V2 364 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 NXPE3Q969Y0 559 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 KCNK12Q9HB15 430 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.25■□□□□ 0.03
PSMD11-207ENST00000578397 CNTN3Q9P232 1028 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 MTRRQ9UBK8 725 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 BACE2Q9Y5Z0 518 aa15.25■□□□□ 0.03
PSMD11-207ENST00000578397 MYO10Q9HD67 2058 aa15.24■□□□□ 0.03
PSMD11-207ENST00000578397 CLDN3O15551 220 aa15.24■□□□□ 0.03
PSMD11-207ENST00000578397 N4BP1O75113 896 aaKnown RBP15.24■□□□□ 0.03
PSMD11-207ENST00000578397 OR1D2P34982 312 aa15.24■□□□□ 0.03
PSMD11-207ENST00000578397 NCKAP1LP55160 1127 aa15.24■□□□□ 0.03
PSMD11-207ENST00000578397 SOX4Q06945 474 aaPredicted RBP15.24■□□□□ 0.03
PSMD11-207ENST00000578397 MCL1Q07820 350 aa15.24■□□□□ 0.03
PSMD11-207ENST00000578397 SF3A1Q15459 793 aaKnown RBP15.24■□□□□ 0.03
PSMD11-207ENST00000578397 UVSSAQ2YD98 709 aa15.24■□□□□ 0.03
PSMD11-207ENST00000578397 GPBP1Q86WP2 473 aa15.24■□□□□ 0.03
PSMD11-207ENST00000578397 ZBTB45Q96K62 511 aaPredicted RBP15.24■□□□□ 0.03
PSMD11-207ENST00000578397 ZMAT2Q96NC0 199 aaKnown RBP15.24■□□□□ 0.03
PSMD11-207ENST00000578397 SMOC2Q9H3U7 446 aa15.24■□□□□ 0.03
PSMD11-207ENST00000578397 GOLGA2P5Q9HBQ8 144 aa15.24■□□□□ 0.03
PSMD11-207ENST00000578397 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.24■□□□□ 0.03
PSMD11-207ENST00000578397 NPHP3-ACAD11A0A0J9YXS1 232 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 VPS37CA5D8V6 355 aaPredicted RBP15.23■□□□□ 0.03
PSMD11-207ENST00000578397 PODXLO00592 558 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 ADAM12O43184 909 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 PDGFBP01127 241 aaPredicted RBP15.23■□□□□ 0.03
PSMD11-207ENST00000578397 C8AP07357 584 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 POU2F2P09086 479 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 HARSP12081 509 aaKnown RBP15.23■□□□□ 0.03
PSMD11-207ENST00000578397 IGFBP6P24592 240 aaPredicted RBP15.23■□□□□ 0.03
PSMD11-207ENST00000578397 ABCD1P33897 745 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 ZNF131P52739 623 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 VCPP55072 806 aaKnown RBP15.23■□□□□ 0.03
PSMD11-207ENST00000578397 KYAT1Q16773 422 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 SLC10A6Q3KNW5 377 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 PPM1LQ5SGD2 360 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 HAUS6Q7Z4H7 955 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 C3orf58Q8NDZ4 430 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 PRSS33Q8NF86 280 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 RASSF8Q8NHQ8 419 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 MYADMQ96S97 322 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 REEP2Q9BRK0 252 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 CCSER1Q9C0I3 900 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 IRF2BPLQ9H1B7 796 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 PLEKHA5Q9HAU0 1116 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 PARVGQ9HBI0 331 aa15.23■□□□□ 0.03
PSMD11-207ENST00000578397 BLOC1S4Q9NUP1 217 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms