RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 AOC1P19801 751 aa18.25■□□□□ 0.51
CDK5RAP3-206ENST00000578018 HOXA9P31269 272 aa18.25■□□□□ 0.51
CDK5RAP3-206ENST00000578018 YARSP54577 528 aaKnown RBP18.25■□□□□ 0.51
CDK5RAP3-206ENST00000578018 ALKAL1Q6UXT8 129 aa18.25■□□□□ 0.51
CDK5RAP3-206ENST00000578018 FLCNQ8NFG4 579 aa18.25■□□□□ 0.51
CDK5RAP3-206ENST00000578018 ATOH1Q92858 354 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP3-206ENST00000578018 NXPE3Q969Y0 559 aa18.25■□□□□ 0.51
CDK5RAP3-206ENST00000578018 SNX27Q96L92 541 aa18.25■□□□□ 0.51
CDK5RAP3-206ENST00000578018 FBXL21Q9UKT6 434 aa18.25■□□□□ 0.51
CDK5RAP3-206ENST00000578018 RBM19Q9Y4C8 960 aaKnown RBP18.25■□□□□ 0.51
CDK5RAP3-206ENST00000578018 MYH15Q9Y2K3 1946 aa18.25■□□□□ 0.51
CDK5RAP3-206ENST00000578018 FAM186AA6NE01 2351 aa18.25■□□□□ 0.51
CDK5RAP3-206ENST00000578018 SLC16A4O15374 487 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 MCF2P10911 925 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 GJB2P29033 226 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 OR1D2P34982 312 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 OSTNP61366 133 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 HTR4Q13639 388 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 RAB33AQ14088 237 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 ZRSR1Q15695 479 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 PPM1LQ5SGD2 360 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 MPZL3Q6UWV2 235 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 SIX5Q8N196 739 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 SLC44A3Q8N4M1 653 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 KCTD17Q8N5Z5 321 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 DDX27Q96GQ7 796 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 ZMAT2Q96NC0 199 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 VPS13AQ96RL7 3174 aa18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 PTPRZ1P23471 2315 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-206ENST00000578018 DMDP11532 3685 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 VWA3AA6NCI4 1184 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 SFI1A8K8P3 1242 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 ANHXE9PGG2 379 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 I3L4J1 428 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 MEFVO15553 781 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 CFHP08603 1231 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 POU2F2P09086 479 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 SRFP11831 508 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 FSHRP23945 695 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 TKTP29401 623 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 BRCC3P46736 316 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 NTHL1P78549 312 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 RAD51AP2Q09MP3 1159 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 ARL6IP4Q66PJ3 421 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 RSPO2Q6UXX9 243 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 GRASPQ7Z6J2 395 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 SYT2Q8N9I0 419 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 SLC7A14Q8TBB6 771 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 SPIRE2Q8WWL2 714 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 NTPCRQ9BSD7 190 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 SLC38A7Q9NVC3 462 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 CNTN3Q9P232 1028 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 WNT16Q9UBV4 365 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 BACE2Q9Y5Z0 518 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 CDY1Q9Y6F8 540 aa18.23■□□□□ 0.51
CDK5RAP3-206ENST00000578018 H3BQV1 296 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 CCL16O15467 120 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 TRAPPC3O43617 180 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 PLS3P13797 630 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 KCNE1P15382 129 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 SLC12A3P55017 1021 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 TMEM119Q4V9L6 283 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 AXDND1Q5T1B0 1012 aaPredicted RBP18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 ANKS3Q6ZW76 656 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 TMEM161BQ8NDZ6 487 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 ACAP3Q96P50 834 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 PLIN2Q99541 437 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 TCHPQ9BT92 498 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 ZFP37Q9Y6Q3 630 aaPredicted RBP18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 NUMBLQ9Y6R0 609 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 CFAP54Q96N23 3096 aa18.22■□□□□ 0.51
CDK5RAP3-206ENST00000578018 KRBA1A5PL33 1030 aa18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 PODXLO00592 558 aa18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 PI15O43692 258 aa18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 XYLBO75191 536 aa18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 TOM1L1O75674 476 aa18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 MAPTP10636 758 aaKnown RBP18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 HARSP12081 509 aaKnown RBP18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 NOLC1Q14978 699 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 ZBTB45Q96K62 511 aaPredicted RBP18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 KCND2Q9NZV8 630 aa18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 ANKFY1Q9P2R3 1169 aa18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 CDH7Q9ULB5 785 aa18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 GVINP1Q7Z2Y8 2422 aa18.21■□□□□ 0.51
CDK5RAP3-206ENST00000578018 PROB1E7EW31 1015 aa18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 GFRA3O60609 400 aa18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 PLA2G4BP0C869 781 aa18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 STRN3Q13033 797 aa18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 UVSSAQ2YD98 709 aa18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 CCDC105Q8IYK2 499 aa18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 ST13P5Q8NFI4 369 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 GPR152Q8TDT2 470 aa18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 C18orf25Q96B23 403 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 CDK5RAP3Q96JB5 506 aa18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 RTP3Q9BQQ7 232 aa18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 UPF2Q9HAU5 1272 aaKnown RBP18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 KCNG1Q9UIX4 513 aa18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 POLIQ9UNA4 740 aa18.2■□□□□ 0.5
CDK5RAP3-206ENST00000578018 NPHP3-ACAD11A0A0J9YXS1 232 aa18.19■□□□□ 0.5
CDK5RAP3-206ENST00000578018 NBL1P41271 181 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms