RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 FLCNQ8NFG4 579 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 ATOH1Q92858 354 aaPredicted RBP16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 NXPE3Q969Y0 559 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 ACAP3Q96P50 834 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 PNMA5Q96PV4 448 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 PTPRHQ9HD43 1115 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 SLC38A7Q9NVC3 462 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 FAM86C1Q9NVL1 165 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 KCNG1Q9UIX4 513 aa16.37■□□□□ 0.21
RN7SL560P-201ENST00000577943 H0Y858 1186 aa16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 ADAM12O43184 909 aa16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 NARSO43776 548 aaKnown RBP16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 C8AP07357 584 aa16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 HNRNPA1P09651 372 aaKnown RBP eCLIP16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 MCF2P10911 925 aa16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 HARSP12081 509 aaKnown RBP16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 PLS3P13797 630 aa16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 FGFR3P22607 806 aa16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 IGFBP6P24592 240 aaPredicted RBP16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 TKTP29401 623 aaKnown RBP16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 OR1D2P34982 312 aa16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 CLCN5P51795 746 aa16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 SOX4Q06945 474 aaPredicted RBP16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 LARP1BQ659C4 914 aaKnown RBP16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 ALKAL1Q6UXT8 129 aa16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 GRASPQ7Z6J2 395 aaPredicted RBP16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 DDX27Q96GQ7 796 aaKnown RBP16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 NTPCRQ9BSD7 190 aaKnown RBP16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 POLIQ9UNA4 740 aa16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.36■□□□□ 0.21
RN7SL560P-201ENST00000577943 I3L4J1 428 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 CCL16O15467 120 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 XYLBO75191 536 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 CFHP08603 1231 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 PLA2G4BP0C869 781 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 LAMP2P13473 410 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 PROZP22891 400 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 FSHRP23945 695 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 BRCC3P46736 316 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 SLC12A3P55017 1021 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 RAB33AQ14088 237 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 XKR4Q5GH76 650 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 AXDND1Q5T1B0 1012 aaPredicted RBP16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 CD300LGQ6UXG3 332 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 ANKS3Q6ZW76 656 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 SIX5Q8N196 739 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 SLC44A3Q8N4M1 653 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 C3orf58Q8NDZ4 430 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 TMEM161BQ8NDZ6 487 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 SPIRE2Q8WWL2 714 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 ZBTB45Q96K62 511 aaPredicted RBP16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 SNX27Q96L92 541 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 KCND2Q9NZV8 630 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 ANKFY1Q9P2R3 1169 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 MTRRQ9UBK8 725 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 CDY1Q9Y6F8 540 aa16.35■□□□□ 0.21
RN7SL560P-201ENST00000577943 ANK1P16157 1881 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 STK25O00506 426 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 PODXLO00592 558 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 ABLIM1O14639 778 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 TOM1L1O75674 476 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 HOXA9P31269 272 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 MATR3P43243 847 aaKnown RBP eCLIP16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 NTHL1P78549 312 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 NOLC1Q14978 699 aaKnown RBP eCLIP16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 UVSSAQ2YD98 709 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 TMEM119Q4V9L6 283 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 CWF19L1Q69YN2 538 aaKnown RBP16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 SLC7A14Q8TBB6 771 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 CALML4Q96GE6 196 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 AK8Q96MA6 479 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 ZMAT2Q96NC0 199 aaKnown RBP16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 CNTN3Q9P232 1028 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 LARSQ9P2J5 1176 aaKnown RBP16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 WNT16Q9UBV4 365 aa16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 ZFP37Q9Y6Q3 630 aaPredicted RBP16.34■□□□□ 0.21
RN7SL560P-201ENST00000577943 MIA3Q5JRA6 1907 aa16.33■□□□□ 0.21
RN7SL560P-201ENST00000577943 USP34Q70CQ2 3546 aa16.33■□□□□ 0.2
RN7SL560P-201ENST00000577943 NPHP3-ACAD11A0A0J9YXS1 232 aa16.33■□□□□ 0.2
RN7SL560P-201ENST00000577943 MAPTP10636 758 aaKnown RBP16.33■□□□□ 0.2
RN7SL560P-201ENST00000577943 SRFP11831 508 aa16.33■□□□□ 0.2
RN7SL560P-201ENST00000577943 KCNE1P15382 129 aa16.33■□□□□ 0.2
RN7SL560P-201ENST00000577943 NPR3P17342 541 aa16.33■□□□□ 0.2
RN7SL560P-201ENST00000577943 RFX1P22670 979 aa16.33■□□□□ 0.2
RN7SL560P-201ENST00000577943 UBA7P41226 1012 aa16.33■□□□□ 0.2
RN7SL560P-201ENST00000577943 BICD1Q96G01 975 aa16.33■□□□□ 0.2
RN7SL560P-201ENST00000577943 TBC1D32Q96NH3 1257 aa16.33■□□□□ 0.2
RN7SL560P-201ENST00000577943 NUB1Q9Y5A7 615 aa16.33■□□□□ 0.2
RN7SL560P-201ENST00000577943 BACE2Q9Y5Z0 518 aa16.33■□□□□ 0.2
RN7SL560P-201ENST00000577943 H0YCG3 227 aa16.32■□□□□ 0.2
RN7SL560P-201ENST00000577943 CLDN3O15551 220 aa16.32■□□□□ 0.2
RN7SL560P-201ENST00000577943 PI15O43692 258 aa16.32■□□□□ 0.2
RN7SL560P-201ENST00000577943 AOC1P19801 751 aa16.32■□□□□ 0.2
RN7SL560P-201ENST00000577943 RPL9P32969 192 aaKnown RBP16.32■□□□□ 0.2
RN7SL560P-201ENST00000577943 DHX8Q14562 1220 aaKnown RBP16.32■□□□□ 0.2
RN7SL560P-201ENST00000577943 SEZ6Q53EL9 994 aa16.32■□□□□ 0.2
RN7SL560P-201ENST00000577943 RSPO2Q6UXX9 243 aaPredicted RBP16.32■□□□□ 0.2
RN7SL560P-201ENST00000577943 ZPBP2Q6X784 338 aa16.32■□□□□ 0.2
RN7SL560P-201ENST00000577943 ST13P5Q8NFI4 369 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms