RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SPECC1Q5M775 1068 aa17.58■□□□□ 0.4
VAPA-204ENST00000577901 ATL3Q6DD88 541 aa17.58■□□□□ 0.4
VAPA-204ENST00000577901 GET4Q7L5D6 327 aaPredicted RBP17.58■□□□□ 0.4
VAPA-204ENST00000577901 LINC00301Q8NCQ3 95 aa17.58■□□□□ 0.4
VAPA-204ENST00000577901 BSNDQ8WZ55 320 aa17.58■□□□□ 0.4
VAPA-204ENST00000577901 EPSTI1Q96J88 318 aa17.58■□□□□ 0.4
VAPA-204ENST00000577901 CLIC6Q96NY7 704 aa17.58■□□□□ 0.4
VAPA-204ENST00000577901 FZD8Q9H461 694 aa17.58■□□□□ 0.4
VAPA-204ENST00000577901 CACNG4Q9UBN1 327 aa17.58■□□□□ 0.4
VAPA-204ENST00000577901 CFAP45Q9UL16 551 aa17.58■□□□□ 0.4
VAPA-204ENST00000577901 TDRD15B5MCY1 1934 aaKnown RBP17.57■□□□□ 0.4
VAPA-204ENST00000577901 SF3B1O75533 1304 aaKnown RBP eCLIP17.57■□□□□ 0.48e-10■■■■■ 31
VAPA-204ENST00000577901 CCDC169A6NNP5 214 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 SPTLC2O15270 562 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 PPP6R2O75170 966 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 YEATS4O95619 227 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 LAMP2P13473 410 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 PLCG1P19174 1290 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 DDIT3P35638 169 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 PEX3P56589 373 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 FOXK2Q01167 660 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 HSP90AA2PQ14568 343 aaPredicted RBP17.57■□□□□ 0.4
VAPA-204ENST00000577901 FAM187BQ17R55 369 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 TMEM132AQ24JP5 1023 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 FOXD4L6Q3SYB3 417 aaPredicted RBP17.57■□□□□ 0.4
VAPA-204ENST00000577901 RTP2Q5QGT7 225 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 PRSS55Q6UWB4 352 aaPredicted RBP17.57■□□□□ 0.4
VAPA-204ENST00000577901 FOXD4L3Q6VB84 417 aaPredicted RBP17.57■□□□□ 0.4
VAPA-204ENST00000577901 GPR152Q8TDT2 470 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 PAAF1Q9BRP4 392 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 TBC1D17Q9HA65 648 aa17.57■□□□□ 0.4
VAPA-204ENST00000577901 DAXXQ9UER7 740 aaPredicted RBP17.57■□□□□ 0.4
VAPA-204ENST00000577901 PHLPP2Q6ZVD8 1323 aa17.56■□□□□ 0.4
VAPA-204ENST00000577901 ANHXE9PGG2 379 aa17.56■□□□□ 0.4
VAPA-204ENST00000577901 K7ERI5 159 aa17.56■□□□□ 0.4
VAPA-204ENST00000577901 ACKR2O00590 384 aa17.56■□□□□ 0.4
VAPA-204ENST00000577901 ZMYND10O75800 440 aa17.56■□□□□ 0.4
VAPA-204ENST00000577901 PRPF4BQ13523 1007 aaKnown RBP17.56■□□□□ 0.4
VAPA-204ENST00000577901 PKP1Q13835 747 aa17.56■□□□□ 0.4
VAPA-204ENST00000577901 DHX8Q14562 1220 aaKnown RBP17.56■□□□□ 0.4
VAPA-204ENST00000577901 RRAGBQ5VZM2 374 aa17.56■□□□□ 0.4
VAPA-204ENST00000577901 USP49Q70CQ1 688 aa17.56■□□□□ 0.4
VAPA-204ENST00000577901 RAD54LQ92698 747 aa17.56■□□□□ 0.4
VAPA-204ENST00000577901 KMT5AQ9NQR1 393 aa17.56■□□□□ 0.4
VAPA-204ENST00000577901 RBM19Q9Y4C8 960 aaKnown RBP17.56■□□□□ 0.4
VAPA-204ENST00000577901 WDR87Q6ZQQ6 2873 aa17.56■□□□□ 0.4
VAPA-204ENST00000577901 DCHS1Q96JQ0 3298 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 CASTOR2A6NHX0 329 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 SFI1A8K8P3 1242 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 PRKCBP05771 671 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 KRT18P05783 430 aaKnown RBP17.55■□□□□ 0.4
VAPA-204ENST00000577901 LIG1P18858 919 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 FSHRP23945 695 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 NPTX2P47972 431 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 SMTNP53814 917 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 RAD51AP2Q09MP3 1159 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 TUSC3Q13454 348 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 HTR4Q13639 388 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 PHLDB3Q6NSJ2 640 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 CCDC73Q6ZRK6 1079 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 GPBP1Q86WP2 473 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 DAW1Q8N136 415 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 ST13P5Q8NFI4 369 aaPredicted RBP17.55■□□□□ 0.4
VAPA-204ENST00000577901 HASPINQ8TF76 798 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 LARP4BQ92615 738 aaKnown RBP17.55■□□□□ 0.4
VAPA-204ENST00000577901 NTPCRQ9BSD7 190 aaKnown RBP17.55■□□□□ 0.4
VAPA-204ENST00000577901 KIFC3Q9BVG8 833 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 ARHGEF3Q9NR81 526 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 BLOC1S4Q9NUP1 217 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 STK17AQ9UEE5 414 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 ZFP37Q9Y6Q3 630 aaPredicted RBP17.55■□□□□ 0.4
VAPA-204ENST00000577901 NUMBLQ9Y6R0 609 aa17.55■□□□□ 0.4
VAPA-204ENST00000577901 N4BP3O15049 544 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 KIF4AO95239 1232 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 PLS3P13797 630 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 MAPK7Q13164 816 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 MCM6Q14566 821 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 ARSHQ5FYA8 562 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 FAM171A1Q5VUB5 890 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 GRASPQ7Z6J2 395 aaPredicted RBP17.54■□□□□ 0.4
VAPA-204ENST00000577901 CEP57Q86XR8 500 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 KCNG4Q8TDN1 519 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 CLSTN3Q9BQT9 956 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 TTPALQ9BTX7 342 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 CCDC113Q9H0I3 377 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 TMEM134Q9H6X4 195 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 SLC2A4RGQ9NR83 387 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 SNTG2Q9NY99 539 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 LARSQ9P2J5 1176 aaKnown RBP17.54■□□□□ 0.4
VAPA-204ENST00000577901 FBXW11Q9UKB1 542 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 ODF2LQ9ULJ1 636 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 SIT1Q9Y3P8 196 aa17.54■□□□□ 0.4
VAPA-204ENST00000577901 TTLL13PA6NNM8 815 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 PTGESO14684 152 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 CUTAO60888 179 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 THP07101 528 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 DCNP07585 359 aaKnown RBP17.53■□□□□ 0.4
VAPA-204ENST00000577901 PSMD5Q16401 504 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 LIN9Q5TKA1 542 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 DCLRE1AQ6PJP8 1040 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms