RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 MT-CO1P00395 513 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 AMY1AP04745 511 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 PCSK1P29120 753 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 ALDH1A3P47895 512 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 MTMR1Q13613 665 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 FAM50AQ14320 339 aaKnown RBP4.84□□□□□ -1.63
TOP2A-203ENST00000577706 UBXN2BQ14CS0 331 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 BEAN1Q3B7T3 259 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 RRP12Q5JTH9 1297 aaKnown RBP4.84□□□□□ -1.63
TOP2A-203ENST00000577706 GJC2Q5T442 439 aaPredicted RBP4.84□□□□□ -1.63
TOP2A-203ENST00000577706 TSHZ3Q63HK5 1081 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 ZGPATQ8N5A5 531 aaKnown RBP4.84□□□□□ -1.63
TOP2A-203ENST00000577706 MKS1Q9NXB0 559 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 MOCS1Q9NZB8 636 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 SLC23A1Q9UHI7 598 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 TUBD1Q9UJT1 453 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 TRHDEQ9UKU6 1024 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 INTUQ9ULD6 942 aa4.84□□□□□ -1.63
TOP2A-203ENST00000577706 GAGE12BA1L429 117 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 GAGE12HA6NDE8 117 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 MASP2O00187 686 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 KATNA1O75449 491 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 PRSS23O95084 383 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 POMCP01189 267 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 ATP5JP18859 108 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 C5AR1P21730 350 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 SLC6A2P23975 617 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 ITKQ08881 620 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 ACAP2Q15057 778 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 PCBP2Q15366 365 aaKnown RBP eCLIP4.83□□□□□ -1.64
TOP2A-203ENST00000577706 SYDE2Q5VT97 1194 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 AGAP9Q5VTM2 703 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 OTUD7BQ6GQQ9 843 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 PRIMA1Q86XR5 153 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 PLXDC1Q8IUK5 500 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 PRPF38AQ8NAV1 312 aaKnown RBP4.83□□□□□ -1.64
TOP2A-203ENST00000577706 CPEB3Q8NE35 698 aaKnown RBP4.83□□□□□ -1.64
TOP2A-203ENST00000577706 WDR11Q9BZH6 1224 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 TMEM140Q9NV12 185 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 FBXO34Q9NWN3 711 aa4.83□□□□□ -1.64
TOP2A-203ENST00000577706 CCDC78A2IDD5 438 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 UNC119BA6NIH7 251 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 NDUFS2O75306 463 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 ELANEP08246 267 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 MYBL2P10244 700 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 BMPR1AP36894 532 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 ZEB1P37275 1124 aaPredicted RBP4.82□□□□□ -1.64
TOP2A-203ENST00000577706 WASP42768 502 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 RESTQ13127 1097 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 MTM1Q13496 603 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 ABCB5Q2M3G0 1257 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 ZKSCAN2Q63HK3 967 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 ZNF529Q6P280 563 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 UBE3BQ7Z3V4 1068 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 ARHGEF19Q8IW93 802 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 RHOT2Q8IXI1 618 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.82□□□□□ -1.64
TOP2A-203ENST00000577706 CASKIN2Q8WXE0 1202 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 RAB24Q969Q5 203 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 CYFIP2Q96F07 1278 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 ADAM2Q99965 735 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 SERHL2Q9H4I8 314 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 KLHL11Q9NVR0 708 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 RUVBL1Q9Y265 456 aaKnown RBP4.82□□□□□ -1.64
TOP2A-203ENST00000577706 ATP11BQ9Y2G3 1177 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 PCDHA13Q9Y5I0 950 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 FPGT-TNNI3KV9GXZ4 949 aa4.82□□□□□ -1.64
TOP2A-203ENST00000577706 MYBBP1AQ9BQG0 1328 aaKnown RBP4.81□□□□□ -1.64
TOP2A-203ENST00000577706 WASHC2CQ9Y4E1 1318 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 TCRBV7S2A1N4TA0A589 114 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 GRID2IPA4D2P6 1211 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 KLHL33A6NCF5 533 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 ZAR1LA6NP61 321 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 FAM171A2A8MVW0 826 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 FZD9O00144 591 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 GABRDO14764 452 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 PPFIA4O75335 1185 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 SPATA31D3P0C874 917 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 DDCP20711 480 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 C21orf58P58505 322 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 ATP8B2P98198 1209 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 TP53BP2Q13625 1128 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 SYCE2Q6PIF2 218 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 SPATA31D4Q6ZUB0 917 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 SEM1Q6ZVN7 128 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 RHOT1Q8IXI2 618 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 DRC7Q8IY82 874 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 OR56A1Q8NGH5 318 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 NTN5Q8WTR8 489 aaPredicted RBP4.81□□□□□ -1.64
TOP2A-203ENST00000577706 MTMR8Q96EF0 704 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 FUBP3Q96I24 572 aaKnown RBP eCLIP4.81□□□□□ -1.64
TOP2A-203ENST00000577706 C7orf25Q9BPX7 421 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 ZSWIM1Q9BR11 485 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 GSTO2Q9H4Y5 243 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 MANSC1Q9H8J5 431 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 ADARB2Q9NS39 739 aaKnown RBP4.81□□□□□ -1.64
TOP2A-203ENST00000577706 FAM30AQ9NZY2 134 aa4.81□□□□□ -1.64
TOP2A-203ENST00000577706 TNKSO95271 1327 aa4.8□□□□□ -1.64
TOP2A-203ENST00000577706 LOC105371045A0A1W2PR82 267 aa4.8□□□□□ -1.64
TOP2A-203ENST00000577706 MARCH11A6NNE9 402 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms