RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 CXCL8P10145 99 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 MATR3P43243 847 aaKnown RBP eCLIP13.01□□□□□ -0.33
LITAF-219ENST00000576334 SMTNP53814 917 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 YARSP54577 528 aaKnown RBP13.01□□□□□ -0.33
LITAF-219ENST00000576334 NTHL1P78549 312 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 NOLC1Q14978 699 aaKnown RBP eCLIP13.01□□□□□ -0.33
LITAF-219ENST00000576334 ZC2HC1CQ53FD0 456 aaPredicted RBP13.01□□□□□ -0.33
LITAF-219ENST00000576334 SLC39A4Q6P5W5 647 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 DYMQ7RTS9 669 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 MYCT1Q8N699 235 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 TDRD5Q8NAT2 981 aaKnown RBP13.01□□□□□ -0.33
LITAF-219ENST00000576334 RSAD2Q8WXG1 361 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 PIK3R5Q8WYR1 880 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 SMG7Q92540 1137 aaKnown RBP13.01□□□□□ -0.33
LITAF-219ENST00000576334 PBXIP1Q96AQ6 731 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 ACAP3Q96P50 834 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 FIZ1Q96SL8 496 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 FNIP2Q9P278 1114 aa13.01□□□□□ -0.33
LITAF-219ENST00000576334 DOCK8Q8NF50 2099 aa13□□□□□ -0.33
LITAF-219ENST00000576334 MYH15Q9Y2K3 1946 aa13□□□□□ -0.33
LITAF-219ENST00000576334 ANKRD63C9JTQ0 380 aa13□□□□□ -0.33
LITAF-219ENST00000576334 K7ENM7 598 aa13□□□□□ -0.33
LITAF-219ENST00000576334 PODXLO00592 558 aa13□□□□□ -0.33
LITAF-219ENST00000576334 FAM13AO94988 1023 aa13□□□□□ -0.33
LITAF-219ENST00000576334 KRT18P05783 430 aaKnown RBP13□□□□□ -0.33
LITAF-219ENST00000576334 PDCP20941 246 aa13□□□□□ -0.33
LITAF-219ENST00000576334 FGFR3P22607 806 aa13□□□□□ -0.33
LITAF-219ENST00000576334 OR1D2P34982 312 aa13□□□□□ -0.33
LITAF-219ENST00000576334 PLA2G5P39877 138 aa13□□□□□ -0.33
LITAF-219ENST00000576334 GUCY2FP51841 1108 aa13□□□□□ -0.33
LITAF-219ENST00000576334 ZNF131P52739 623 aa13□□□□□ -0.33
LITAF-219ENST00000576334 VCPP55072 806 aaKnown RBP13□□□□□ -0.33
LITAF-219ENST00000576334 SIGLEC14Q08ET2 396 aa13□□□□□ -0.33
LITAF-219ENST00000576334 DCLRE1AQ6PJP8 1040 aa13□□□□□ -0.33
LITAF-219ENST00000576334 C15orf39Q6ZRI6 1047 aa13□□□□□ -0.33
LITAF-219ENST00000576334 CCDC149Q6ZUS6 474 aa13□□□□□ -0.33
LITAF-219ENST00000576334 SPRYD3Q8NCJ5 442 aa13□□□□□ -0.33
LITAF-219ENST00000576334 LARP4BQ92615 738 aaKnown RBP13□□□□□ -0.33
LITAF-219ENST00000576334 BICD1Q96G01 975 aa13□□□□□ -0.33
LITAF-219ENST00000576334 DDX27Q96GQ7 796 aaKnown RBP13□□□□□ -0.33
LITAF-219ENST00000576334 INTS4Q96HW7 963 aaKnown RBP13□□□□□ -0.33
LITAF-219ENST00000576334 MYADMQ96S97 322 aa13□□□□□ -0.33
LITAF-219ENST00000576334 CCSER1Q9C0I3 900 aa13□□□□□ -0.33
LITAF-219ENST00000576334 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13□□□□□ -0.33
LITAF-219ENST00000576334 TOPORSQ9NS56 1045 aaPredicted RBP13□□□□□ -0.33
LITAF-219ENST00000576334 KCND2Q9NZV8 630 aa13□□□□□ -0.33
LITAF-219ENST00000576334 CNTN3Q9P232 1028 aa13□□□□□ -0.33
LITAF-219ENST00000576334 LARSQ9P2J5 1176 aaKnown RBP13□□□□□ -0.33
LITAF-219ENST00000576334 TFIP11Q9UBB9 837 aaKnown RBP13□□□□□ -0.33
LITAF-219ENST00000576334 ODF2LQ9ULJ1 636 aa13□□□□□ -0.33
LITAF-219ENST00000576334 TBX20Q9UMR3 447 aa13□□□□□ -0.33
LITAF-219ENST00000576334 SRPRBQ9Y5M8 271 aaKnown RBP13□□□□□ -0.33
LITAF-219ENST00000576334 MUC6Q6W4X9 2439 aa13□□□□□ -0.33
LITAF-219ENST00000576334 KMT2EQ8IZD2 1858 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 MYMKA6NI61 221 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 TMEM189-UBE2V1I3L0A0 370 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 CLDN3O15551 220 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 STX6O43752 255 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 TRAK2O60296 914 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 FAM189A1O60320 539 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 BMP15O95972 392 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 KCNE1P15382 129 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 DDIT3P35638 169 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 MCL1Q07820 350 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 FOXD4L6Q3SYB3 417 aaPredicted RBP12.99□□□□□ -0.33
LITAF-219ENST00000576334 FOXD4L3Q6VB84 417 aaPredicted RBP12.99□□□□□ -0.33
LITAF-219ENST00000576334 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.99□□□□□ -0.33
LITAF-219ENST00000576334 ZDHHC14Q8IZN3 488 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 CMASQ8NFW8 434 aaPredicted RBP12.99□□□□□ -0.33
LITAF-219ENST00000576334 FAM122AQ96E09 287 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 PARVGQ9HBI0 331 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 WDR6Q9NNW5 1121 aaKnown RBP12.99□□□□□ -0.33
LITAF-219ENST00000576334 TBC1D7Q9P0N9 293 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 FBXW11Q9UKB1 542 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 SORCS3Q9UPU3 1222 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 USTQ9Y2C2 406 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 CDY1Q9Y6F8 540 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 ZDBF2Q9HCK1 2354 aa12.99□□□□□ -0.33
LITAF-219ENST00000576334 CLUHO75153 1309 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 PPEF2O14830 753 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 HNRNPDLO14979 420 aaKnown RBP12.98□□□□□ -0.33
LITAF-219ENST00000576334 CCL16O15467 120 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 NARSO43776 548 aaKnown RBP12.98□□□□□ -0.33
LITAF-219ENST00000576334 ZMYND10O75800 440 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 GBP2P32456 591 aaPredicted RBP12.98□□□□□ -0.33
LITAF-219ENST00000576334 LIG4P49917 911 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 KCNA1Q09470 495 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 MTMR3Q13615 1198 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 ENOX2Q16206 610 aaKnown RBP12.98□□□□□ -0.33
LITAF-219ENST00000576334 ZPBP2Q6X784 338 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 GET4Q7L5D6 327 aaPredicted RBP12.98□□□□□ -0.33
LITAF-219ENST00000576334 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
LITAF-219ENST00000576334 GRASPQ7Z6J2 395 aaPredicted RBP12.98□□□□□ -0.33
LITAF-219ENST00000576334 SFR1Q86XK3 245 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 KCTD17Q8N5Z5 321 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 STAMQ92783 540 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 UROC1Q96N76 676 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 PRKD2Q9BZL6 878 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 PLEKHA4Q9H4M7 779 aa12.98□□□□□ -0.33
LITAF-219ENST00000576334 KCNK12Q9HB15 430 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms