RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 IFNB1P01574 187 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 LDHCP07864 332 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 BMP3P12645 472 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 KRT5P13647 590 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 MRPS35P82673 323 aaKnown RBP15.46■□□□□ 0.07
SCARF1-209ENST00000576012 IZUMO3Q5VZ72 239 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 ZNF804AQ7Z570 1209 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 CERKQ8TCT0 537 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 ASAP3Q8TDY4 903 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 SNF8Q96H20 258 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 RBM15Q96T37 977 aaKnown RBP eCLIP15.46■□□□□ 0.07
SCARF1-209ENST00000576012 ARMCX1Q9P291 453 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 WASF2Q9Y6W5 498 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 BCRP11274 1271 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 FGFR1P11362 822 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 PSMC4P43686 418 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 RASSF2P50749 326 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 PPP3CAQ08209 521 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 MTMR2Q13614 643 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 SPDYCQ5MJ68 293 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 RNF43Q68DV7 783 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 NLRP9Q7RTR0 991 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 CCDC125Q86Z20 511 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 ACSF2Q96CM8 615 aaPredicted RBP15.46■□□□□ 0.07
SCARF1-209ENST00000576012 SCOCQ9UIL1 159 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 SNED1Q8TER0 1413 aa15.46■□□□□ 0.07
SCARF1-209ENST00000576012 PLS3P13797 630 aa15.46■□□□□ 0.06
SCARF1-209ENST00000576012 CD58P19256 250 aa15.46■□□□□ 0.06
SCARF1-209ENST00000576012 GSTO1P78417 241 aa15.46■□□□□ 0.06
SCARF1-209ENST00000576012 SIX1Q15475 284 aaPredicted RBP15.46■□□□□ 0.06
SCARF1-209ENST00000576012 ASPRV1Q53RT3 343 aa15.46■□□□□ 0.06
SCARF1-209ENST00000576012 AGGF1Q8N302 714 aaeCLIP15.46■□□□□ 0.06
SCARF1-209ENST00000576012 GLIS1Q8NBF1 620 aa15.46■□□□□ 0.06
SCARF1-209ENST00000576012 NRG4Q8WWG1 115 aa15.46■□□□□ 0.06
SCARF1-209ENST00000576012 MIPEPQ99797 713 aa15.46■□□□□ 0.06
SCARF1-209ENST00000576012 CCDC77Q9BR77 488 aa15.46■□□□□ 0.06
SCARF1-209ENST00000576012 ANKRD2Q9GZV1 360 aa15.46■□□□□ 0.06
SCARF1-209ENST00000576012 LRMDAQ9H2I8 198 aa15.46■□□□□ 0.06
SCARF1-209ENST00000576012 C10orf88Q9H8K7 445 aa15.46■□□□□ 0.06
SCARF1-209ENST00000576012 CDH16O75309 829 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 CACNA2D1P54289 1103 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 TNFAIP8L3Q5GJ75 292 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 ANKRD35Q8N283 1001 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 SLC25A41Q8N5S1 370 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 B4GALNT2Q8NHY0 566 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 RFWD2Q8NHY2 731 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 AGPAT3Q9NRZ7 376 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 RALAP11233 206 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 P3H1Q32P28 736 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 FOXB2Q5VYV0 432 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 PPP1R21Q6ZMI0 780 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 TEX9Q8N6V9 391 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 WDR60Q8WVS4 1066 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 EPAS1Q99814 870 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 VCXQ9H320 206 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 UBR2Q8IWV8 1755 aa15.45■□□□□ 0.06
SCARF1-209ENST00000576012 GAS8O95995 478 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 MARK3P27448 753 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 RPA1P27694 616 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 MAPK4P31152 587 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 PLEKHG4Q58EX7 1191 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 LVRNQ6Q4G3 990 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 CPA5Q8WXQ8 436 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 GBP5Q96PP8 586 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 TTC1Q99614 292 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 CBWD1Q9BRT8 395 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 TMEM109Q9BVC6 243 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.44■□□□□ 0.06
SCARF1-209ENST00000576012 GYG2O15488 501 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 UFL1O94874 794 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 NEK3P51956 506 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 PLCB3Q01970 1234 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 ROR2Q01974 943 aaKnown RBP15.44■□□□□ 0.06
SCARF1-209ENST00000576012 CYFIP1Q7L576 1253 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 OTOAQ7RTW8 1153 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 TTC7BQ86TV6 843 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 PASD1Q8IV76 773 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 PDCD7Q8N8D1 485 aaKnown RBP15.44■□□□□ 0.06
SCARF1-209ENST00000576012 RBBP8NLQ8NC74 664 aaPredicted RBP15.44■□□□□ 0.06
SCARF1-209ENST00000576012 STMN2Q93045 179 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 SMC6Q96SB8 1091 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 MKNK1Q9BUB5 465 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 PARVGQ9HBI0 331 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 ARL8BQ9NVJ2 186 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 A0A1B0GUL6 1792 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 MSH4O15457 936 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 KRT10P13645 584 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 GYS1P13807 737 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 ADRA1DP25100 572 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 CETN2P41208 172 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 BFSP1Q12934 665 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 ORC2Q13416 577 aaPredicted RBP15.44■□□□□ 0.06
SCARF1-209ENST00000576012 THOC5Q13769 683 aaKnown RBP15.44■□□□□ 0.06
SCARF1-209ENST00000576012 SPARCL1Q14515 664 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 EFTUD2Q15029 972 aaKnown RBP eCLIP15.44■□□□□ 0.06
SCARF1-209ENST00000576012 ACSBG2Q5FVE4 666 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 ZC3H3Q8IXZ2 948 aaKnown RBP15.44■□□□□ 0.06
SCARF1-209ENST00000576012 PI4K2AQ9BTU6 479 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 WNT8AQ9H1J5 351 aa15.44■□□□□ 0.06
SCARF1-209ENST00000576012 OCEL1Q9H607 264 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms