RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 TTC39AQ5SRH9 613 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 MFSD5Q6N075 450 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 NFRKBQ6P4R8 1299 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 BLOC1S3Q6QNY0 202 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 SHC4Q6S5L8 630 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 IZUMO2Q6UXV1 221 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 TRMT44Q8IYL2 757 aaKnown RBP8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 HACE1Q8IYU2 909 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 TRIML2Q8N7C3 387 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 MINDY2Q8NBR6 621 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 OR2W6PQ8NHA6 318 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 RHPN1Q8TCX5 695 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 OSCP1Q8WVF1 389 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 RASSF5Q8WWW0 418 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 SEC14L1Q92503 715 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 AIFM3Q96NN9 605 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 NOX5Q96PH1 765 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 BTBD9Q96Q07 612 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 DDX50Q9BQ39 737 aaKnown RBP8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 AGXT2Q9BYV1 514 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 LRRC27Q9C0I9 530 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 LACRTQ9GZZ8 138 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 VPS16Q9H269 839 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 SLITRK6Q9H5Y7 841 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 FGFR1OP2Q9NVK5 253 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 GNPTGQ9UJJ9 305 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 ANGPTL3Q9Y5C1 460 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 PCDHB4Q9Y5E5 795 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 TLL2Q9Y6L7 1015 aa8.44□□□□□ -1.06
TOM1L1-220ENST00000575333 ESYT3A0FGR9 886 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 DDX3XO00571 662 aaKnown RBP eCLIP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 TBX10O75333 385 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 UFL1O94874 794 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 KLHL2O95198 593 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 ESRRAP11474 423 aaPredicted RBP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 MZF1P28698 734 aaPredicted RBP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 EPHB2P29323 1055 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 IFNA8P32881 189 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 LONP1P36776 959 aaKnown RBP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 AP2B1P63010 937 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 MST1RQ04912 1400 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 PTK2BQ14289 1009 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 KRT31Q15323 416 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 SF3B3Q15393 1217 aaKnown RBP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 RGS21Q2M5E4 152 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 TUSC1Q2TAM9 212 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 HSP90AA4PQ58FG1 418 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 CEP78Q5JTW2 689 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 CYP4A22Q5TCH4 519 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 C6orf163Q5TEZ5 329 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 SLC30A10Q6XR72 485 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 AGMOQ6ZNB7 445 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 FRA10AC1Q70Z53 315 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 TMC7Q7Z402 723 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 FOXP4Q8IVH2 680 aaPredicted RBP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 PDZD8Q8NEN9 1154 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 ANKRD49Q8WVL7 239 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 CKAP2Q8WWK9 683 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 SLC7A6OSQ96CW6 309 aaPredicted RBP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 KRT12Q99456 494 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 TMEM60Q9H2L4 133 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 EHD1Q9H4M9 534 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 Q9H521 79 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 GPAMQ9HCL2 828 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 DDX18Q9NVP1 670 aaKnown RBP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 NDE1Q9NXR1 346 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 TMEM59LQ9UK28 342 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 TRAF3IP3Q9Y228 551 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 B3GNT3Q9Y2A9 372 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 DIS3Q9Y2L1 958 aaKnown RBP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 STARD13Q9Y3M8 1113 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 CACNA1FO60840 1977 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 A0A1W2PQJ5 194 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 CCDC160A6NGH7 325 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 SNTNA6NMZ2 147 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 DCDC2CA8MYV0 355 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 TCP11X1B4DZS4 312 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 B8ZZF3 427 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 AQP9O43315 295 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 RAD51CO43502 376 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 FOXD2O60548 495 aaPredicted RBP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 TOM1O60784 492 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 RNASEH1O60930 286 aaKnown RBP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 DTNBO60941 627 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 GUCY1B2O75343 617 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 ZNF254O75437 659 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 CTDNEP1O95476 244 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 STAMBPO95630 424 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 FYNP06241 537 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 UQCRBP14927 111 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 NAGAP17050 411 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 DDX5P17844 614 aaKnown RBP8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 CES1P23141 567 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 HOXD13P35453 343 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 ERVK-9P63128 1117 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 CDK18Q07002 472 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 KRT81Q14533 505 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 PPP2R5EQ16537 467 aa8.43□□□□□ -1.06
TOM1L1-220ENST00000575333 ZNF829Q3KNS6 432 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms