RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 IMPACTQ9P2X3 320 aa25.99■■□□□ 1.75
ATPAF1-213ENST00000574428 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.99■■□□□ 1.75
ATPAF1-213ENST00000574428 TIMP1P01033 207 aa25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 GYPCP04921 128 aa25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 TMEM191BP0C7N4 346 aa25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 TRIM21P19474 475 aaKnown RBP25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 TMEM132DQ14C87 1099 aa25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 TRIM65Q6PJ69 517 aa25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 ALKAL1Q6UXT8 129 aa25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 HACE1Q8IYU2 909 aa25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 TMEM130Q8N3G9 435 aa25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 CPLX3Q8WVH0 158 aa25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 SEMA4DQ92854 862 aa25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 KIF12Q96FN5 646 aa25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 ZMAT2Q96NC0 199 aaKnown RBP25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.98■■□□□ 1.75
ATPAF1-213ENST00000574428 ATF7P17544 494 aaPredicted RBP25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 AP3M2P53677 418 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 GOLGA8FQ08AF8 430 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 GOLGA8DPQ0D2H9 430 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 GLRA4Q5JXX5 417 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 SCARA3Q6AZY7 606 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 MRPL10Q7Z7H8 261 aaKnown RBP25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 PPFIBP1Q86W92 1011 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 CD302Q8IX05 232 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 FBXL13Q8NEE6 735 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 NEK11Q8NG66 645 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 LMO3Q8TAP4 145 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 TSPYL2Q9H2G4 693 aaPredicted RBP25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 CNTN3Q9P232 1028 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 ALPK3Q96L96 1907 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 ZNF623O75123 536 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 PHACTR2O75167 634 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 VNN1O95497 513 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 TNNC2P02585 160 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 RAG1P15918 1043 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 DPY19L2P1Q6NXN4 242 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 TRAPPC11Q7Z392 1133 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 ECHDC2Q86YB7 292 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 EHBP1Q8NDI1 1231 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 APBB2Q92870 758 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 ANKRD36BP1Q96IX9 119 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 SIX2Q9NPC8 291 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 RRAGDQ9NQL2 400 aaPredicted RBP25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 COQ4Q9Y3A0 265 aa25.97■■□□□ 1.75
ATPAF1-213ENST00000574428 TET1Q8NFU7 2136 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 C9IYK1 514 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 NOL4O94818 638 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 SKIP12755 728 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 PIK3CAP42336 1068 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 AGMOQ6ZNB7 445 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 SLC24A5Q71RS6 500 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 CCDC186Q7Z3E2 898 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 ELMO3Q96BJ8 720 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 ABHD8Q96I13 439 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 ZFP42Q96MM3 310 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 TTYH3Q9C0H2 523 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 RAB20Q9NX57 234 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 C2CD2Q9Y426 696 aa25.96■■□□□ 1.75
ATPAF1-213ENST00000574428 GOLGA6L6A8MZA4 724 aa25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 RNF225M0QZC1 329 aaPredicted RBP25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 HLA-DRAP01903 254 aa25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 CASP14P31944 242 aa25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 MLH1P40692 756 aa25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 FXR1P51114 621 aaKnown RBP eCLIP25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 GUCY2FP51841 1108 aa25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 ARID5BQ14865 1188 aa25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 ZSCAN30Q86W11 494 aa25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 VWCEQ96DN2 955 aa25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 NUP58Q9BVL2 599 aa25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 GANQ9H2C0 597 aa25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 PLCB1Q9NQ66 1216 aa25.95■■□□□ 1.75
ATPAF1-213ENST00000574428 RFC2P35250 354 aa25.95■■□□□ 1.74
ATPAF1-213ENST00000574428 LRMPQ12912 555 aa25.95■■□□□ 1.74
ATPAF1-213ENST00000574428 TRIM14Q14142 442 aa25.95■■□□□ 1.74
ATPAF1-213ENST00000574428 XKR4Q5GH76 650 aa25.95■■□□□ 1.74
ATPAF1-213ENST00000574428 GAD1Q99259 594 aa25.95■■□□□ 1.74
ATPAF1-213ENST00000574428 PI4K2AQ9BTU6 479 aa25.95■■□□□ 1.74
ATPAF1-213ENST00000574428 DERAQ9Y315 318 aa25.95■■□□□ 1.74
ATPAF1-213ENST00000574428 TRIP11Q15643 1979 aa25.95■■□□□ 1.74
ATPAF1-213ENST00000574428 SMIM28A0A1B0GU29 152 aa25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 ENPP3O14638 875 aa25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 ADKP55263 362 aaKnown RBP25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 NCOA4Q13772 614 aa25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 KLHDC7AQ5VTJ3 777 aa25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 GJB7Q6PEY0 223 aa25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 ZNF598Q86UK7 904 aaKnown RBP25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 C1orf127Q8N9H9 656 aa25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 CACTINQ8WUQ7 758 aaKnown RBP25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 C18orf25Q96B23 403 aaPredicted RBP25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 PGBD4Q96DM1 585 aa25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 C1orf112Q9NSG2 853 aa25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 TUBGCP4Q9UGJ1 667 aa25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 GIT1Q9Y2X7 761 aa25.94■■□□□ 1.74
ATPAF1-213ENST00000574428 PTGESO14684 152 aa25.93■■□□□ 1.74
ATPAF1-213ENST00000574428 KCNE1P15382 129 aa25.93■■□□□ 1.74
ATPAF1-213ENST00000574428 CSF2RAP15509 400 aa25.93■■□□□ 1.74
ATPAF1-213ENST00000574428 AFF1P51825 1210 aaKnown RBP25.93■■□□□ 1.74
ATPAF1-213ENST00000574428 POLR2FP61218 127 aaKnown RBP25.93■■□□□ 1.74
ATPAF1-213ENST00000574428 FIGNQ5HY92 759 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms