RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CDC42EP1Q00587 391 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 TARDBPQ13148 414 aaKnown RBP eCLIP6.33□□□□□ -1.4
CDC27-216ENST00000574304 IL10RAQ13651 578 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 UBXN2BQ14CS0 331 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 UAP1L1Q3KQV9 507 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 PDCD4Q53EL6 469 aaKnown RBP6.33□□□□□ -1.4
CDC27-216ENST00000574304 METRNLQ641Q3 311 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 SPATA31D4Q6ZUB0 917 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 RHOUQ7L0Q8 258 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 MRGPREQ86SM8 312 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 RSPH3Q86UC2 560 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 ZBTB46Q86UZ6 589 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 NEU4Q8WWR8 484 aaPredicted RBP6.33□□□□□ -1.4
CDC27-216ENST00000574304 TMX3Q96JJ7 454 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 PCED1AQ9H1Q7 454 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 AKIP1Q9NQ31 210 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 TYW1Q9NV66 732 aaKnown RBP6.33□□□□□ -1.4
CDC27-216ENST00000574304 FBXO34Q9NWN3 711 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 FAM30AQ9NZY2 134 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 SERPINB13Q9UIV8 391 aa6.33□□□□□ -1.4
CDC27-216ENST00000574304 ING1Q9UK53 422 aaPredicted RBP6.33□□□□□ -1.4
CDC27-216ENST00000574304 GAGE12BA1L429 117 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 GAGE12HA6NDE8 117 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 SGTAO43765 313 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 PPFIA4O75335 1185 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 ZRANB2O95218 330 aaKnown RBP eCLIP6.32□□□□□ -1.4
CDC27-216ENST00000574304 SLPIP03973 132 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 ITGB1P05556 798 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 LAG3P18627 525 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 CTXN1P60606 82 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 TIGD2Q4W5G0 525 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 AGAP9Q5VTM2 703 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 LRRC55Q6ZSA7 311 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 UBE3BQ7Z3V4 1068 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 MIER2Q8N344 545 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 CHMP4CQ96CF2 233 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 ATP11BQ9Y2G3 1177 aa6.32□□□□□ -1.4
CDC27-216ENST00000574304 ALAS1P13196 640 aa6.31□□□□□ -1.4
CDC27-216ENST00000574304 CREMQ03060 361 aa6.31□□□□□ -1.4
CDC27-216ENST00000574304 FHL2Q14192 279 aa6.31□□□□□ -1.4
CDC27-216ENST00000574304 ATP2B3Q16720 1220 aa6.31□□□□□ -1.4
CDC27-216ENST00000574304 PPP4R3AQ6IN85 833 aa6.31□□□□□ -1.4
CDC27-216ENST00000574304 KCNV1Q6PIU1 500 aa6.31□□□□□ -1.4
CDC27-216ENST00000574304 RHOT2Q8IXI1 618 aa6.31□□□□□ -1.4
CDC27-216ENST00000574304 IFI44Q8TCB0 444 aa6.31□□□□□ -1.4
CDC27-216ENST00000574304 LARP4BQ92615 738 aaKnown RBP6.31□□□□□ -1.4
CDC27-216ENST00000574304 KAT5Q92993 513 aa6.31□□□□□ -1.4
CDC27-216ENST00000574304 MYEOVQ96EZ4 313 aa6.31□□□□□ -1.4
CDC27-216ENST00000574304 SORCS2Q96PQ0 1159 aa6.31□□□□□ -1.4
CDC27-216ENST00000574304 REXO4Q9GZR2 422 aaKnown RBP6.31□□□□□ -1.4
CDC27-216ENST00000574304 C11orf54Q9H0W9 315 aaPredicted RBP6.31□□□□□ -1.4
CDC27-216ENST00000574304 DDX56Q9NY93 547 aaKnown RBP6.31□□□□□ -1.4
CDC27-216ENST00000574304 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.31□□□□□ -1.4
CDC27-216ENST00000574304 TCRBV7S2A1N4TA0A589 114 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 KIAA0391O15091 583 aaKnown RBP6.3□□□□□ -1.4
CDC27-216ENST00000574304 NDUFA10O95299 355 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 ABHD16AO95870 558 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 SLC6A2P23975 617 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 NEK2P51955 445 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 BEAN1Q3B7T3 259 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 TMEM240Q5SV17 173 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 TSHZ3Q63HK5 1081 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 CMTR2Q8IYT2 770 aaKnown RBP6.3□□□□□ -1.4
CDC27-216ENST00000574304 AMER2Q8N7J2 671 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 OR56A1Q8NGH5 318 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 PROKR1Q8TCW9 393 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 STAG1Q8WVM7 1258 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 MLST8Q9BVC4 326 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 LUC7L2Q9Y383 392 aaKnown RBP6.3□□□□□ -1.4
CDC27-216ENST00000574304 PCDHB1Q9Y5F3 818 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 CFAP20Q9Y6A4 193 aaKnown RBP6.3□□□□□ -1.4
CDC27-216ENST00000574304 FPGT-TNNI3KV9GXZ4 949 aa6.3□□□□□ -1.4
CDC27-216ENST00000574304 RPLP2P05387 115 aaKnown RBP6.29□□□□□ -1.4
CDC27-216ENST00000574304 PDGFRBP09619 1106 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 GCSHP23434 173 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 RAB39AQ14964 217 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 LY6G5CQ5SRR4 150 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 DACT2Q5SW24 774 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 ZNF627Q7L945 461 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 CPA6Q8N4T0 437 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 DCBLD1Q8N8Z6 715 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 CLPTM1LQ96KA5 538 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 MRGPRX4Q96LA9 322 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 CEP89Q96ST8 783 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 GSTO2Q9H4Y5 243 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 AASDHPPTQ9NRN7 309 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 KLHL11Q9NVR0 708 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 HS3ST4Q9Y661 456 aa6.29□□□□□ -1.4
CDC27-216ENST00000574304 CENPVL1A0A0U1RR11 272 aa6.28□□□□□ -1.4
CDC27-216ENST00000574304 TMEM200CA6NKL6 621 aa6.28□□□□□ -1.4
CDC27-216ENST00000574304 LPXNO60711 386 aa6.28□□□□□ -1.4
CDC27-216ENST00000574304 PRSS23O95084 383 aa6.28□□□□□ -1.4
CDC27-216ENST00000574304 IL33O95760 270 aa6.28□□□□□ -1.4
CDC27-216ENST00000574304 HLA-DOAP06340 250 aa6.28□□□□□ -1.4
CDC27-216ENST00000574304 BMPR1AP36894 532 aa6.28□□□□□ -1.4
CDC27-216ENST00000574304 PTPAQ15257 358 aa6.28□□□□□ -1.4
CDC27-216ENST00000574304 GADL1Q6ZQY3 521 aa6.28□□□□□ -1.4
CDC27-216ENST00000574304 TTC7BQ86TV6 843 aa6.28□□□□□ -1.4
CDC27-216ENST00000574304 ULK2Q8IYT8 1036 aa6.28□□□□□ -1.4
CDC27-216ENST00000574304 FITM2Q8N6M3 262 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 206 ms