RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 ZNF396Q96N95 335 aaPredicted RBP18.03■□□□□ 0.48
TVP23B-207ENST00000574294 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
TVP23B-207ENST00000574294 TBX20Q9UMR3 447 aa18.03■□□□□ 0.48
TVP23B-207ENST00000574294 PLXNA3P51805 1871 aa18.03■□□□□ 0.48
TVP23B-207ENST00000574294 NPHP3-ACAD11A0A0J9YXS1 232 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 HNRNPDLO14979 420 aaKnown RBP18.02■□□□□ 0.48
TVP23B-207ENST00000574294 TGM5O43548 720 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 PIGRP01833 764 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 MATR3P43243 847 aaKnown RBP eCLIP18.02■□□□□ 0.481e-6■■■■□ 24.8
TVP23B-207ENST00000574294 LIG4P49917 911 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 CLCNKBP51801 687 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 OSTNP61366 133 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 GLRA4Q5JXX5 417 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 RTP2Q5QGT7 225 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 RRAGBQ5VZM2 374 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 TRIM67Q6ZTA4 783 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 DENND4AQ7Z401 1863 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 CEP57Q86XR8 500 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 UBALD2Q8IYN6 164 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 LNX1Q8TBB1 728 aaPredicted RBP18.02■□□□□ 0.48
TVP23B-207ENST00000574294 EPSTI1Q96J88 318 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 KCNH6Q9H252 994 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 ST6GALNAC4Q9H4F1 302 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 SEL1LQ9UBV2 794 aa18.02■□□□□ 0.48
TVP23B-207ENST00000574294 MYO10Q9HD67 2058 aa18.02■□□□□ 0.47
TVP23B-207ENST00000574294 TECTAO75443 2155 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 TRIOO75962 3097 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 CCDC195A0A1B0GUA6 201 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 K7ENM7 598 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 XPOTO43592 962 aaKnown RBP18.01■□□□□ 0.47
TVP23B-207ENST00000574294 FGFR3P22607 806 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 NASPP49321 788 aaPredicted RBP18.01■□□□□ 0.47
TVP23B-207ENST00000574294 SIGLEC14Q08ET2 396 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 ANKS3Q6ZW76 656 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 SV2BQ7L1I2 683 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 PALB2Q86YC2 1186 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 HASPINQ8TF76 798 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 HVCN1Q96D96 273 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 ZBTB45Q96K62 511 aaPredicted RBP18.01■□□□□ 0.47
TVP23B-207ENST00000574294 B3GALT6Q96L58 329 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 CXCL16Q9H2A7 254 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 CACNG4Q9UBN1 327 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 SORCS3Q9UPU3 1222 aa18.01■□□□□ 0.47
TVP23B-207ENST00000574294 C2orf16Q68DN1 1984 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 C2CD4DB7Z1M9 353 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 HNRNPA1P09651 372 aaKnown RBP eCLIP18■□□□□ 0.47
TVP23B-207ENST00000574294 HARSP12081 509 aaKnown RBP18■□□□□ 0.47
TVP23B-207ENST00000574294 GAP43P17677 238 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 GTF2BQ00403 316 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 CEBPZQ03701 1054 aaKnown RBP18■□□□□ 0.47
TVP23B-207ENST00000574294 MTMR3Q13615 1198 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 LIN9Q5TKA1 542 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 PRSS55Q6UWB4 352 aaPredicted RBP18■□□□□ 0.47
TVP23B-207ENST00000574294 CD302Q8IX05 232 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 KREMEN2Q8NCW0 462 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 LRRC15Q8TF66 581 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 USP28Q96RU2 1077 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 CLSTN3Q9BQT9 956 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 ZHX3Q9H4I2 956 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 WDR6Q9NNW5 1121 aaKnown RBP18■□□□□ 0.47
TVP23B-207ENST00000574294 BACE2Q9Y5Z0 518 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 PDCD11Q14690 1871 aaKnown RBP18■□□□□ 0.47
TVP23B-207ENST00000574294 VWA8A3KMH1 1905 aa18■□□□□ 0.47
TVP23B-207ENST00000574294 PODXLO00592 558 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 SYN3O14994 580 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 OGTO15294 1046 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 ZMYND10O75800 440 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 WEE2P0C1S8 567 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 HOXA9P31269 272 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 POU5F1Q01860 360 aaKnown RBP17.99■□□□□ 0.47
TVP23B-207ENST00000574294 PPP2R3AQ06190 1150 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 RAB33AQ14088 237 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 STK38Q15208 465 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 UVSSAQ2YD98 709 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 SLC10A6Q3KNW5 377 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 SLFN12LQ6IEE8 588 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 FAM173BQ6P4H8 233 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 MAP4K3Q8IVH8 894 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 SMG7Q92540 1137 aaKnown RBP17.99■□□□□ 0.47
TVP23B-207ENST00000574294 ZMAT2Q96NC0 199 aaKnown RBP17.99■□□□□ 0.47
TVP23B-207ENST00000574294 PRKD2Q9BZL6 878 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 LRRC27Q9C0I9 530 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 PIDD1Q9HB75 910 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 MTRRQ9UBK8 725 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 CDH22Q9UJ99 828 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 FBXW11Q9UKB1 542 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 NUB1Q9Y5A7 615 aa17.99■□□□□ 0.47
TVP23B-207ENST00000574294 MYH15Q9Y2K3 1946 aa17.98■□□□□ 0.47
TVP23B-207ENST00000574294 A0A0B4J269 797 aa17.98■□□□□ 0.47
TVP23B-207ENST00000574294 TTC26A0AVF1 554 aa17.98■□□□□ 0.47
TVP23B-207ENST00000574294 TMEM221A6NGB7 291 aa17.98■□□□□ 0.47
TVP23B-207ENST00000574294 H7C4K7 107 aa17.98■□□□□ 0.47
TVP23B-207ENST00000574294 M0R296 226 aa17.98■□□□□ 0.47
TVP23B-207ENST00000574294 PPP6R2O75170 966 aa17.98■□□□□ 0.47
TVP23B-207ENST00000574294 YEATS4O95619 227 aa17.98■□□□□ 0.47
TVP23B-207ENST00000574294 RPL17P18621 184 aaKnown RBP17.98■□□□□ 0.47
TVP23B-207ENST00000574294 CYP3A5P20815 502 aa17.98■□□□□ 0.47
TVP23B-207ENST00000574294 SP100P23497 879 aaPredicted RBP17.98■□□□□ 0.47
TVP23B-207ENST00000574294 PAX3P23760 479 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms