RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 POLIQ9UNA4 740 aa23.16■■□□□ 1.3
CHRNB1-206ENST00000574054 I3L4J1 428 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 CCL16O15467 120 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 TRAPPC3O43617 180 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 HNRNPA1P09651 372 aaKnown RBP eCLIP23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 PLA2G4BP0C869 781 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 TKTP29401 623 aaKnown RBP23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 MCM2P49736 904 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 SOX4Q06945 474 aaPredicted RBP23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 UPP1Q16831 310 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 HYIQ5T013 277 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 MPZL3Q6UWV2 235 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 C3orf58Q8NDZ4 430 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 SLC7A14Q8TBB6 771 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 SNX27Q96L92 541 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 ACAP3Q96P50 834 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 SLC38A7Q9NVC3 462 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 ANKFY1Q9P2R3 1169 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 MTRRQ9UBK8 725 aa23.15■■□□□ 1.3
CHRNB1-206ENST00000574054 XYLBO75191 536 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 CFHP08603 1231 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 LAMP2P13473 410 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 PLS3P13797 630 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 BRCC3P46736 316 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 CLCN5P51795 746 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 SMTNP53814 917 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 NTHL1P78549 312 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 ARL6IP4Q66PJ3 421 aaKnown RBP23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 CWF19L1Q69YN2 538 aaKnown RBP23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 CD300LGQ6UXG3 332 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 ALKAL1Q6UXT8 129 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 SLC44A3Q8N4M1 653 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 SYT2Q8N9I0 419 aaPredicted RBP23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 ST13P5Q8NFI4 369 aaPredicted RBP23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 SPIRE2Q8WWL2 714 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 DDX27Q96GQ7 796 aaKnown RBP23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 ZBTB45Q96K62 511 aaPredicted RBP23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 CDY1Q9Y6F8 540 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 TRIP11Q15643 1979 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 VWA8A3KMH1 1905 aa23.14■■□□□ 1.29
CHRNB1-206ENST00000574054 USP34Q70CQ2 3546 aa23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 STK25O00506 426 aa23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 PODXLO00592 558 aa23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 RFX1P22670 979 aa23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 PROZP22891 400 aa23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 SLC12A3P55017 1021 aa23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 RAB33AQ14088 237 aa23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 XKR4Q5GH76 650 aa23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 AXDND1Q5T1B0 1012 aaPredicted RBP23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 LARP1BQ659C4 914 aaKnown RBP23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 TMEM161BQ8NDZ6 487 aa23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 NXPE3Q969Y0 559 aa23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 ZMAT2Q96NC0 199 aaKnown RBP23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 DOCK8Q8NF50 2099 aa23.13■■□□□ 1.29
CHRNB1-206ENST00000574054 NPHP3-ACAD11A0A0J9YXS1 232 aa23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 ABLIM1O14639 778 aa23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 MAPTP10636 758 aaKnown RBP23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 KCNE1P15382 129 aa23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 HOXA9P31269 272 aa23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 MATR3P43243 847 aaKnown RBP eCLIP23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 CACNB1Q02641 598 aaPredicted RBP23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 NOLC1Q14978 699 aaKnown RBP eCLIP23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 TMEM119Q4V9L6 283 aa23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 RSPO2Q6UXX9 243 aaPredicted RBP23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 ANKS3Q6ZW76 656 aa23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 C18orf25Q96B23 403 aaPredicted RBP23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 NTPCRQ9BSD7 190 aaKnown RBP23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 KCNG1Q9UIX4 513 aa23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 CA14Q9ULX7 337 aa23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 VPS13AQ96RL7 3174 aa23.12■■□□□ 1.29
CHRNB1-206ENST00000574054 TOM1L1O75674 476 aa23.11■■□□□ 1.29
CHRNB1-206ENST00000574054 SRFP11831 508 aa23.11■■□□□ 1.29
CHRNB1-206ENST00000574054 NPR3P17342 541 aa23.11■■□□□ 1.29
CHRNB1-206ENST00000574054 HTR4Q13639 388 aa23.11■■□□□ 1.29
CHRNB1-206ENST00000574054 SEZ6Q53EL9 994 aa23.11■■□□□ 1.29
CHRNB1-206ENST00000574054 KCTD17Q8N5Z5 321 aa23.11■■□□□ 1.29
CHRNB1-206ENST00000574054 BICD1Q96G01 975 aa23.11■■□□□ 1.29
CHRNB1-206ENST00000574054 KCND2Q9NZV8 630 aa23.11■■□□□ 1.29
CHRNB1-206ENST00000574054 CNTN3Q9P232 1028 aa23.11■■□□□ 1.29
CHRNB1-206ENST00000574054 NUB1Q9Y5A7 615 aa23.11■■□□□ 1.29
CHRNB1-206ENST00000574054 BACE2Q9Y5Z0 518 aa23.11■■□□□ 1.29
CHRNB1-206ENST00000574054 DOCK6Q96HP0 2047 aa23.1■■□□□ 1.29
CHRNB1-206ENST00000574054 PI15O43692 258 aa23.1■■□□□ 1.29
CHRNB1-206ENST00000574054 AOC1P19801 751 aa23.1■■□□□ 1.29
CHRNB1-206ENST00000574054 UBA7P41226 1012 aa23.1■■□□□ 1.29
CHRNB1-206ENST00000574054 CALML4Q96GE6 196 aa23.1■■□□□ 1.29
CHRNB1-206ENST00000574054 TBC1D32Q96NH3 1257 aa23.1■■□□□ 1.29
CHRNB1-206ENST00000574054 WNT16Q9UBV4 365 aa23.1■■□□□ 1.29
CHRNB1-206ENST00000574054 CDH7Q9ULB5 785 aa23.1■■□□□ 1.29
CHRNB1-206ENST00000574054 ZFP37Q9Y6Q3 630 aaPredicted RBP23.1■■□□□ 1.29
CHRNB1-206ENST00000574054 NUMBLQ9Y6R0 609 aa23.1■■□□□ 1.29
CHRNB1-206ENST00000574054 ANHXE9PGG2 379 aa23.09■■□□□ 1.29
CHRNB1-206ENST00000574054 CLDN3O15551 220 aa23.09■■□□□ 1.29
CHRNB1-206ENST00000574054 DHX8Q14562 1220 aaKnown RBP23.09■■□□□ 1.29
CHRNB1-206ENST00000574054 UVSSAQ2YD98 709 aa23.09■■□□□ 1.29
CHRNB1-206ENST00000574054 ARSHQ5FYA8 562 aa23.09■■□□□ 1.29
CHRNB1-206ENST00000574054 VARS2Q5ST30 1063 aaKnown RBP23.09■■□□□ 1.29
CHRNB1-206ENST00000574054 GPBP1Q86WP2 473 aa23.09■■□□□ 1.29
CHRNB1-206ENST00000574054 RASSF8Q8NHQ8 419 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms