RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 CMA1P23946 247 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 ASIC1P78348 528 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 DSG1Q02413 1049 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 BMS1Q14692 1282 aaKnown RBP30.28■■■□□ 2.44
SCARF1-207ENST00000573867 ENOX2Q16206 610 aaKnown RBP30.28■■■□□ 2.44
SCARF1-207ENST00000573867 L1TD1Q5T7N2 865 aaKnown RBP30.28■■■□□ 2.44
SCARF1-207ENST00000573867 CCDC65Q8IXS2 484 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 SMRP1Q8NCR6 262 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 SLC22A17Q8WUG5 538 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 KLHL5Q96PQ7 755 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 MSTO1Q9BUK6 570 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 BLZF1Q9H2G9 400 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 MAGEF1Q9HAY2 307 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 MRPL17Q9NRX2 175 aaKnown RBP30.28■■■□□ 2.44
SCARF1-207ENST00000573867 TCHHQ07283 1943 aa30.28■■■□□ 2.44
SCARF1-207ENST00000573867 TTC26A0AVF1 554 aa30.27■■■□□ 2.44
SCARF1-207ENST00000573867 FSD2A1L4K1 749 aa30.27■■■□□ 2.44
SCARF1-207ENST00000573867 ADSSP30520 456 aa30.27■■■□□ 2.44
SCARF1-207ENST00000573867 GLUD2P49448 558 aa30.27■■■□□ 2.44
SCARF1-207ENST00000573867 SPAG1Q07617 926 aa30.27■■■□□ 2.44
SCARF1-207ENST00000573867 SMAD4Q13485 552 aaKnown RBP30.27■■■□□ 2.44
SCARF1-207ENST00000573867 UPP1Q16831 310 aa30.27■■■□□ 2.44
SCARF1-207ENST00000573867 SYCE2Q6PIF2 218 aa30.27■■■□□ 2.44
SCARF1-207ENST00000573867 LRRC27Q9C0I9 530 aa30.27■■■□□ 2.44
SCARF1-207ENST00000573867 CITO14578 2027 aa30.27■■■□□ 2.44
SCARF1-207ENST00000573867 EPCAMP16422 314 aa30.26■■■□□ 2.43
SCARF1-207ENST00000573867 AMPD3Q01432 767 aa30.26■■■□□ 2.43
SCARF1-207ENST00000573867 PUS10Q3MIT2 529 aaKnown RBP30.26■■■□□ 2.43
SCARF1-207ENST00000573867 ANKRD54Q6NXT1 300 aa30.26■■■□□ 2.43
SCARF1-207ENST00000573867 SCAND2PQ9GZW5 306 aaPredicted RBP30.26■■■□□ 2.43
SCARF1-207ENST00000573867 TUBGCP4Q9UGJ1 667 aa30.26■■■□□ 2.43
SCARF1-207ENST00000573867 CPSF3Q9UKF6 684 aaKnown RBP30.26■■■□□ 2.43
SCARF1-207ENST00000573867 SF3B1O75533 1304 aaKnown RBP eCLIP30.25■■■□□ 2.43
SCARF1-207ENST00000573867 PDCD11Q14690 1871 aaKnown RBP30.25■■■□□ 2.43
SCARF1-207ENST00000573867 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.25■■■□□ 2.43
SCARF1-207ENST00000573867 TMEM189-UBE2V1I3L0A0 370 aa30.25■■■□□ 2.43
SCARF1-207ENST00000573867 PRPF6O94906 941 aaKnown RBP30.25■■■□□ 2.43
SCARF1-207ENST00000573867 AFMP43652 599 aa30.25■■■□□ 2.43
SCARF1-207ENST00000573867 NUCB2P80303 420 aa30.25■■■□□ 2.43
SCARF1-207ENST00000573867 CUL4BQ13620 913 aa30.25■■■□□ 2.43
SCARF1-207ENST00000573867 RTP2Q5QGT7 225 aa30.25■■■□□ 2.43
SCARF1-207ENST00000573867 ACCSQ96QU6 501 aa30.25■■■□□ 2.43
SCARF1-207ENST00000573867 S1PR5Q9H228 398 aa30.25■■■□□ 2.43
SCARF1-207ENST00000573867 RXFP1Q9HBX9 757 aa30.25■■■□□ 2.43
SCARF1-207ENST00000573867 FAM237AA0A1B0GTK4 181 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 LACTBL1A8MY62 500 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 TEX28O15482 410 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 ADRB2P07550 413 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 SLFN14P0C7P3 912 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 EHHADHQ08426 723 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 USP41Q3LFD5 358 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 DCLRE1AQ6PJP8 1040 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 ZSWIM2Q8NEG5 633 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 FEZF2Q8TBJ5 459 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 UROC1Q96N76 676 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 APOL5Q9BWW9 433 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 GOLPH3LQ9H4A5 285 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 PLEKHA5Q9HAU0 1116 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 CD320Q9NPF0 282 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 SLC38A7Q9NVC3 462 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 PCDHB13Q9Y5F0 798 aa30.24■■■□□ 2.43
SCARF1-207ENST00000573867 B3GAT3O94766 335 aa30.23■■■□□ 2.43
SCARF1-207ENST00000573867 HOXD13P35453 343 aa30.23■■■□□ 2.43
SCARF1-207ENST00000573867 ACOT2P49753 483 aa30.23■■■□□ 2.43
SCARF1-207ENST00000573867 CLCN4P51793 760 aa30.23■■■□□ 2.43
SCARF1-207ENST00000573867 NDUFA8P51970 172 aa30.23■■■□□ 2.43
SCARF1-207ENST00000573867 SMAD2Q15796 467 aaKnown RBP30.23■■■□□ 2.43
SCARF1-207ENST00000573867 ZBTB6Q15916 424 aa30.23■■■□□ 2.43
SCARF1-207ENST00000573867 TPRNQ4KMQ1 711 aa30.23■■■□□ 2.43
SCARF1-207ENST00000573867 FAM171A1Q5VUB5 890 aa30.23■■■□□ 2.43
SCARF1-207ENST00000573867 PRSS55Q6UWB4 352 aaPredicted RBP30.23■■■□□ 2.43
SCARF1-207ENST00000573867 RIN2Q8WYP3 895 aaPredicted RBP30.23■■■□□ 2.43
SCARF1-207ENST00000573867 CASP10Q92851 521 aa30.23■■■□□ 2.43
SCARF1-207ENST00000573867 EMILIN2Q9BXX0 1053 aa30.23■■■□□ 2.43
SCARF1-207ENST00000573867 CDH22Q9UJ99 828 aa30.23■■■□□ 2.43
SCARF1-207ENST00000573867 USP15Q9Y4E8 981 aaPredicted RBP30.23■■■□□ 2.43
SCARF1-207ENST00000573867 I3L4J1 428 aa30.22■■■□□ 2.43
SCARF1-207ENST00000573867 PODXLO00592 558 aa30.22■■■□□ 2.43
SCARF1-207ENST00000573867 BRCC3P46736 316 aa30.22■■■□□ 2.43
SCARF1-207ENST00000573867 ALCAMQ13740 583 aa30.22■■■□□ 2.43
SCARF1-207ENST00000573867 KYAT1Q16773 422 aa30.22■■■□□ 2.43
SCARF1-207ENST00000573867 KIAA1841Q6NSI8 718 aa30.22■■■□□ 2.43
SCARF1-207ENST00000573867 KANK3Q6NY19 840 aa30.22■■■□□ 2.43
SCARF1-207ENST00000573867 CRELD2Q6UXH1 353 aaPredicted RBP30.22■■■□□ 2.43
SCARF1-207ENST00000573867 UNC13DQ70J99 1090 aa30.22■■■□□ 2.43
SCARF1-207ENST00000573867 PAGE5Q96GU1 130 aa30.22■■■□□ 2.43
SCARF1-207ENST00000573867 PYM1Q9BRP8 204 aaKnown RBP30.22■■■□□ 2.43
SCARF1-207ENST00000573867 RPF1Q9H9Y2 349 aaKnown RBP30.22■■■□□ 2.43
SCARF1-207ENST00000573867 AGO2Q9UKV8 859 aaKnown RBP30.22■■■□□ 2.43
SCARF1-207ENST00000573867 RPL17P18621 184 aaKnown RBP30.21■■■□□ 2.43
SCARF1-207ENST00000573867 KLRC2P26717 231 aa30.21■■■□□ 2.43
SCARF1-207ENST00000573867 PPP2R3AQ06190 1150 aa30.21■■■□□ 2.43
SCARF1-207ENST00000573867 SLFN12LQ6IEE8 588 aa30.21■■■□□ 2.43
SCARF1-207ENST00000573867 EPM2AIP1Q7L775 607 aaPredicted RBP30.21■■■□□ 2.43
SCARF1-207ENST00000573867 CEP57L1Q8IYX8 460 aa30.21■■■□□ 2.43
SCARF1-207ENST00000573867 TMEM87AQ8NBN3 555 aa30.21■■■□□ 2.43
SCARF1-207ENST00000573867 POMGNT1Q8WZA1 660 aa30.21■■■□□ 2.43
SCARF1-207ENST00000573867 KIF12Q96FN5 646 aa30.21■■■□□ 2.43
SCARF1-207ENST00000573867 EXOC7Q9UPT5 735 aa30.21■■■□□ 2.43
SCARF1-207ENST00000573867 VWA8A3KMH1 1905 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms