RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.08■□□□□ 0.64
SMG6-214ENST00000573827 HAUS6Q7Z4H7 955 aa19.08■□□□□ 0.64
SMG6-214ENST00000573827 SNX21Q969T3 373 aa19.08■□□□□ 0.64
SMG6-214ENST00000573827 UROC1Q96N76 676 aa19.08■□□□□ 0.64
SMG6-214ENST00000573827 USP28Q96RU2 1077 aa19.08■□□□□ 0.64
SMG6-214ENST00000573827 PLEKHA4Q9H4M7 779 aa19.08■□□□□ 0.64
SMG6-214ENST00000573827 TOPORSQ9NS56 1045 aaPredicted RBP19.08■□□□□ 0.64
SMG6-214ENST00000573827 FBXW11Q9UKB1 542 aa19.08■□□□□ 0.64
SMG6-214ENST00000573827 CCDC195A0A1B0GUA6 201 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 B3GAT3O94766 335 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 MYBP10242 640 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 PLA2G5P39877 138 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 CREMQ03060 361 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 SIGLEC14Q08ET2 396 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 ELAVL2Q12926 359 aaKnown RBP19.07■□□□□ 0.64
SMG6-214ENST00000573827 NOLC1Q14978 699 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMG6-214ENST00000573827 PSMD5Q16401 504 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 SEZ6Q53EL9 994 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 SLC39A4Q6P5W5 647 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 CYP26C1Q6V0L0 522 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 TDRD5Q8NAT2 981 aaKnown RBP19.07■□□□□ 0.64
SMG6-214ENST00000573827 KREMEN2Q8NCW0 462 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 C18orf25Q96B23 403 aaPredicted RBP19.07■□□□□ 0.64
SMG6-214ENST00000573827 CLIC6Q96NY7 704 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 ACAP3Q96P50 834 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 SMOC2Q9H3U7 446 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 WDR6Q9NNW5 1121 aaKnown RBP19.07■□□□□ 0.64
SMG6-214ENST00000573827 LARSQ9P2J5 1176 aaKnown RBP19.07■□□□□ 0.64
SMG6-214ENST00000573827 HCN4Q9Y3Q4 1203 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 MYO15AQ9UKN7 3530 aa19.07■□□□□ 0.64
SMG6-214ENST00000573827 PDCD11Q14690 1871 aaKnown RBP19.07■□□□□ 0.64
SMG6-214ENST00000573827 ASGR2P07307 311 aa19.06■□□□□ 0.64
SMG6-214ENST00000573827 DDIT3P35638 169 aa19.06■□□□□ 0.64
SMG6-214ENST00000573827 YARSP54577 528 aaKnown RBP19.06■□□□□ 0.64
SMG6-214ENST00000573827 STRN3Q13033 797 aa19.06■□□□□ 0.64
SMG6-214ENST00000573827 CCDC149Q6ZUS6 474 aa19.06■□□□□ 0.64
SMG6-214ENST00000573827 GLYCTKQ8IVS8 523 aa19.06■□□□□ 0.64
SMG6-214ENST00000573827 TMEM130Q8N3G9 435 aa19.06■□□□□ 0.64
SMG6-214ENST00000573827 LARP4BQ92615 738 aaKnown RBP19.06■□□□□ 0.64
SMG6-214ENST00000573827 TCHPQ9BT92 498 aa19.06■□□□□ 0.64
SMG6-214ENST00000573827 PARVGQ9HBI0 331 aa19.06■□□□□ 0.64
SMG6-214ENST00000573827 FOXD4L1Q9NU39 408 aa19.06■□□□□ 0.64
SMG6-214ENST00000573827 ANKFY1Q9P2R3 1169 aa19.06■□□□□ 0.64
SMG6-214ENST00000573827 MTRRQ9UBK8 725 aa19.06■□□□□ 0.64
SMG6-214ENST00000573827 TBX20Q9UMR3 447 aa19.06■□□□□ 0.64
SMG6-214ENST00000573827 VPS13AQ96RL7 3174 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 I3L4J1 428 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 TBC1D4O60343 1298 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 ZMYND10O75800 440 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 ADRB2P07550 413 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 HARSP12081 509 aaKnown RBP19.05■□□□□ 0.64
SMG6-214ENST00000573827 TKTP29401 623 aaKnown RBP19.05■□□□□ 0.64
SMG6-214ENST00000573827 BRCC3P46736 316 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 DHX8Q14562 1220 aaKnown RBP19.05■□□□□ 0.64
SMG6-214ENST00000573827 SLC39A14Q15043 492 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 ZBTB6Q15916 424 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 ZBTB41Q5SVQ8 909 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 DDX27Q96GQ7 796 aaKnown RBP19.05■□□□□ 0.64
SMG6-214ENST00000573827 PRKD2Q9BZL6 878 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 ZDHHC7Q9NXF8 308 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 LIMD1Q9UGP4 676 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 DPP7Q9UHL4 492 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 SORCS3Q9UPU3 1222 aa19.05■□□□□ 0.64
SMG6-214ENST00000573827 USP34Q70CQ2 3546 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 A0A087X0B3 334 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 TTC26A0AVF1 554 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 H0YCG3 227 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 PODXLO00592 558 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 CLDN3O15551 220 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 STX6O43752 255 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 CXCL8P10145 99 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 TNFSF9P41273 254 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 NASPP49321 788 aaPredicted RBP19.04■□□□□ 0.64
SMG6-214ENST00000573827 GTF2BQ00403 316 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 RAB33AQ14088 237 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 OTOP3Q7RTS5 596 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 CEP57Q86XR8 500 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 PLCD3Q8N3E9 789 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 MYCT1Q8N699 235 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 SMG7Q92540 1137 aaKnown RBP19.04■□□□□ 0.64
SMG6-214ENST00000573827 STRA6Q9BX79 667 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 ST6GALNAC4Q9H4F1 302 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 SLC38A7Q9NVC3 462 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 BACE2Q9Y5Z0 518 aa19.04■□□□□ 0.64
SMG6-214ENST00000573827 CLUHO75153 1309 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 A0A0B4J269 797 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 TRAK2O60296 914 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 PPP1R37O75864 691 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 FAM13AO94988 1023 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 CLTAP09496 248 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 SCP2P22307 547 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 NMT1P30419 496 aaKnown RBP19.03■□□□□ 0.64
SMG6-214ENST00000573827 CEBPZQ03701 1054 aaKnown RBP19.03■□□□□ 0.64
SMG6-214ENST00000573827 MRPL58Q14197 206 aaKnown RBP19.03■□□□□ 0.64
SMG6-214ENST00000573827 MAP4K3Q8IVH8 894 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 PBXIP1Q96AQ6 731 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 DNAJC19Q96DA6 116 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 MFSD14AQ96MC6 490 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 MYADMQ96S97 322 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 STK17AQ9UEE5 414 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms