RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ARL2BPQ9Y2Y0 163 aa16.68■□□□□ 0.26
NUP88-207ENST00000573584 COPS2P61201 443 aa16.68■□□□□ 0.26
NUP88-207ENST00000573584 ZKSCAN8Q15776 578 aaPredicted RBP16.68■□□□□ 0.26
NUP88-207ENST00000573584 TKFCQ3LXA3 575 aa16.68■□□□□ 0.26
NUP88-207ENST00000573584 CYP4X1Q8N118 509 aa16.68■□□□□ 0.26
NUP88-207ENST00000573584 KIFC3Q9BVG8 833 aa16.68■□□□□ 0.26
NUP88-207ENST00000573584 NINJ2Q9NZG7 142 aa16.68■□□□□ 0.26
NUP88-207ENST00000573584 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.68■□□□□ 0.26
NUP88-207ENST00000573584 LYPLA2O95372 231 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 RPSAP08865 295 aaKnown RBP16.67■□□□□ 0.26
NUP88-207ENST00000573584 STX2P32856 288 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 BNIP1Q12981 228 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 ACCSLQ4AC99 568 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 KLHL29Q96CT2 875 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 TGS1Q96RS0 853 aaKnown RBP16.67■□□□□ 0.26
NUP88-207ENST00000573584 HEMGNQ9BXL5 484 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 TMOD2Q9NZR1 351 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 FEM1BQ9UK73 627 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 R3HDM2Q9Y2K5 976 aaKnown RBP16.67■□□□□ 0.26
NUP88-207ENST00000573584 SCN9AQ15858 1988 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 CLRN2A0PK11 232 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
NUP88-207ENST00000573584 PLA2G6O60733 806 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 TCEA3O75764 348 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 MCCD1P59942 119 aaPredicted RBP16.67■□□□□ 0.26
NUP88-207ENST00000573584 MTMR1Q13613 665 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 UGCGQ16739 394 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 AOC3Q16853 763 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 SV2AQ7L0J3 742 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 TMEM161BQ8NDZ6 487 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 C7orf43Q8WVR3 580 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 CPA5Q8WXQ8 436 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 STAMBPL1Q96FJ0 436 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 TIPINQ9BVW5 301 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 L3MBTL1Q9Y468 752 aa16.67■□□□□ 0.26
NUP88-207ENST00000573584 O00370 1275 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 NFIBO00712 420 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 GJB6O95452 261 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 MMP10P09238 476 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 RRM1P23921 792 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 GBP2P32456 591 aaPredicted RBP16.66■□□□□ 0.26
NUP88-207ENST00000573584 SLC1A1P43005 524 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 ALDH5A1P51649 535 aaPredicted RBP16.66■□□□□ 0.26
NUP88-207ENST00000573584 ADCY1Q08828 1119 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 XKR9Q5GH70 373 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 PLA2G4FQ68DD2 849 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 MCOLN2Q8IZK6 566 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 FAM81BQ96LP2 452 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 PLCD4Q9BRC7 762 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 PI4K2AQ9BTU6 479 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 NAALADL1Q9UQQ1 740 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 ASTN2O75129 1339 aaPredicted RBP16.66■□□□□ 0.26
NUP88-207ENST00000573584 MROH7Q68CQ1 1323 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 UNGP13051 313 aaPredicted RBP16.66■□□□□ 0.26
NUP88-207ENST00000573584 TLDC1Q6P9B6 456 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 SEPT14Q6ZU15 432 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 NIPA1Q7RTP0 329 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 SRRM1Q8IYB3 904 aaKnown RBP16.66■□□□□ 0.26
NUP88-207ENST00000573584 FITM2Q8N6M3 262 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 SLC17A8Q8NDX2 589 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 CCHCR1Q8TD31 782 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 DEFB129Q9H1M3 183 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 NKIRAS1Q9NYS0 192 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 PNMA3Q9UL41 463 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 SLX4Q8IY92 1834 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 DENND3A2RUS2 1198 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 SORBS3O60504 671 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 CDH16O75309 829 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 CETPP11597 493 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 NPTX2P47972 431 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 MRPS9P82933 396 aaKnown RBP16.66■□□□□ 0.26
NUP88-207ENST00000573584 C2CD6Q53TS8 623 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 ARHGEF18Q6ZSZ5 1173 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 KIF2BQ8N4N8 673 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 TMC2Q8TDI7 906 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 DDX27Q96GQ7 796 aaKnown RBP16.66■□□□□ 0.26
NUP88-207ENST00000573584 RXFP1Q9HBX9 757 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 UBIAD1Q9Y5Z9 338 aa16.66■□□□□ 0.26
NUP88-207ENST00000573584 ONECUT3O60422 494 aaPredicted RBP16.65■□□□□ 0.26
NUP88-207ENST00000573584 RALAP11233 206 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 MKRN3Q13064 507 aaKnown RBP16.65■□□□□ 0.26
NUP88-207ENST00000573584 DAB2IPQ5VWQ8 1189 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 ZNF365Q70YC5 407 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 USP37Q86T82 979 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 MAP4K3Q8IVH8 894 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 C4orf19Q8IY42 314 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 AGAP11Q8TF27 550 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 MFSD14AQ96MC6 490 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 FAM118BQ9BPY3 351 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 CCDC77Q9BR77 488 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 GLIS2Q9BZE0 524 aaPredicted RBP16.65■□□□□ 0.26
NUP88-207ENST00000573584 AVENQ9NQS1 362 aaPredicted RBP16.65■□□□□ 0.26
NUP88-207ENST00000573584 TBC1D22BQ9NU19 505 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 PRKAG3Q9UGI9 489 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 LOXHD1Q8IVV2 1947 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 ICAM1P05362 532 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 MYO1EQ12965 1108 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 DMP1Q13316 513 aaPredicted RBP16.65■□□□□ 0.26
NUP88-207ENST00000573584 LLGL2Q6P1M3 1020 aa16.65■□□□□ 0.26
NUP88-207ENST00000573584 POMGNT1Q8WZA1 660 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms