RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 MFSD1Q9H3U5 465 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 SMOC2Q9H3U7 446 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 WDR6Q9NNW5 1121 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 FOXD4L1Q9NU39 408 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 ZDHHC7Q9NXF8 308 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 ODF2LQ9ULJ1 636 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 POLIQ9UNA4 740 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 NUB1Q9Y5A7 615 aa10.56□□□□□ -0.72
NPLOC4-212ENST00000573328 MIA3Q5JRA6 1907 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 TMEM189-UBE2V1I3L0A0 370 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 I3L4J1 428 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 PODXLO00592 558 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 HNRNPDLO14979 420 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 CLDN3O15551 220 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 TOM1L1O75674 476 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 ZMYND10O75800 440 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 PDGFBP01127 241 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 C8AP07357 584 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 MAPTP10636 758 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 PROZP22891 400 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 TKTP29401 623 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 TXLNAP40222 546 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 BRCC3P46736 316 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 LIG4P49917 911 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 CEBPZQ03701 1054 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 GRIN1Q05586 938 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 SOX4Q06945 474 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 CUL4AQ13619 759 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 MCM6Q14566 821 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 UPP1Q16831 310 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 SEZ6Q53EL9 994 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 PPM1LQ5SGD2 360 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 DCLRE1AQ6PJP8 1040 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 MYCT1Q8N699 235 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 LNX1Q8TBB1 728 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 LARP4BQ92615 738 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 DDX27Q96GQ7 796 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 CLSTN3Q9BQT9 956 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 PRKD2Q9BZL6 878 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 PTPRHQ9HD43 1115 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 FBXW11Q9UKB1 542 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 FBXL21Q9UKT6 434 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 CDY1Q9Y6F8 540 aa10.55□□□□□ -0.72
NPLOC4-212ENST00000573328 CCL16O15467 120 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 XYLBO75191 536 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 C1RP00736 705 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 CXCL8P10145 99 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 FGFR3P22607 806 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 RFX1P22670 979 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 MARCKSP29966 332 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 MCM4P33991 863 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 OR1D2P34982 312 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 VCPP55072 806 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 NCKAP1LP55160 1127 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 NHLH1Q02575 133 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 PPP2R3AQ06190 1150 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 TDGQ13569 410 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 ARSHQ5FYA8 562 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 SPECC1Q5M775 1068 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 LILRA6Q6PI73 481 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 ZPBP2Q6X784 338 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 ANKS3Q6ZW76 656 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 HAUS6Q7Z4H7 955 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 C3orf58Q8NDZ4 430 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 SLC7A14Q8TBB6 771 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 RAD54LQ92698 747 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 C18orf25Q96B23 403 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 ZNF707Q96C28 371 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 ZMAT2Q96NC0 199 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 PRRX2Q99811 253 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 NTPCRQ9BSD7 190 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 KCNK12Q9HB15 430 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 PARVGQ9HBI0 331 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 CNTN3Q9P232 1028 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 IGSF9Q9P2J2 1179 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 MTRRQ9UBK8 725 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 CCDC39Q9UFE4 941 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 CLIC4Q9Y696 253 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 TSC2P49815 1807 aa10.54□□□□□ -0.72
NPLOC4-212ENST00000573328 NOTCH4Q99466 2003 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 ABLIM1O14639 778 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 ADAM12O43184 909 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 TRAK2O60296 914 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 N4BP1O75113 896 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 KCNE1P15382 129 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 SYT1P21579 422 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 FSHRP23945 695 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 IGFBP6P24592 240 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 PTPN5P54829 565 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 ARPP19P56211 112 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 MCL1Q07820 350 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 XKR4Q5GH76 650 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 AXDND1Q5T1B0 1012 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 IER5LQ5T953 404 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 ALKAL1Q6UXT8 129 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 GRASPQ7Z6J2 395 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 KRI1Q8N9T8 703 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 PRSS33Q8NF86 280 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 FLCNQ8NFG4 579 aa10.53□□□□□ -0.72
NPLOC4-212ENST00000573328 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms