RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 MAPK7Q13164 816 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 MTMR3Q13615 1198 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 CUL1Q13616 776 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 OR6B2Q6IFH4 312 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 SRRM1Q8IYB3 904 aaKnown RBP17.28■□□□□ 0.36
RAB40B-206ENST00000571995 EMC1Q8N766 993 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 GPATCH11Q8N954 259 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 EPS8L1Q8TE68 723 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 MCEEQ96PE7 176 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 BTAF1O14981 1849 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.28■□□□□ 0.36
RAB40B-206ENST00000571995 NFKBIEO00221 500 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 STAM2O75886 525 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 RALAP11233 206 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 GTF2H1P32780 548 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 VGLL4Q14135 290 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 CASC4Q6P4E1 433 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 ERICH1Q86X53 443 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 RBBP8NLQ8NC74 664 aaPredicted RBP17.28■□□□□ 0.36
RAB40B-206ENST00000571995 UBA3Q8TBC4 463 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 PLCD4Q9BRC7 762 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 SUCLA2Q9P2R7 463 aaPredicted RBP17.28■□□□□ 0.36
RAB40B-206ENST00000571995 SAE1Q9UBE0 346 aaPredicted RBP17.28■□□□□ 0.36
RAB40B-206ENST00000571995 PARP2Q9UGN5 583 aa17.28■□□□□ 0.36
RAB40B-206ENST00000571995 BASP1P80723 227 aaKnown RBP17.27■□□□□ 0.36
RAB40B-206ENST00000571995 ZC3H18Q86VM9 953 aaKnown RBP17.27■□□□□ 0.36
RAB40B-206ENST00000571995 C1orf131Q8NDD1 294 aaKnown RBP17.27■□□□□ 0.36
RAB40B-206ENST00000571995 CAMKK2Q96RR4 588 aa17.27■□□□□ 0.36
RAB40B-206ENST00000571995 ISCUQ9H1K1 167 aa17.27■□□□□ 0.36
RAB40B-206ENST00000571995 VIPAS39Q9H9C1 493 aa17.27■□□□□ 0.36
RAB40B-206ENST00000571995 EFCC1Q9HA90 598 aa17.27■□□□□ 0.36
RAB40B-206ENST00000571995 STK38LQ9Y2H1 464 aa17.27■□□□□ 0.36
RAB40B-206ENST00000571995 TNFSF9P41273 254 aa17.27■□□□□ 0.36
RAB40B-206ENST00000571995 TMEM161BQ8NDZ6 487 aa17.27■□□□□ 0.36
RAB40B-206ENST00000571995 ALG13Q9NP73 1137 aaKnown RBP17.27■□□□□ 0.36
RAB40B-206ENST00000571995 HEY1Q9Y5J3 304 aa17.27■□□□□ 0.36
RAB40B-206ENST00000571995 GOLGA4Q13439 2230 aaKnown RBP17.27■□□□□ 0.36
RAB40B-206ENST00000571995 ZNF536O15090 1300 aa17.27■□□□□ 0.35
RAB40B-206ENST00000571995 PRLRP16471 622 aa17.27■□□□□ 0.35
RAB40B-206ENST00000571995 MAP1SQ66K74 1059 aaPredicted RBP17.27■□□□□ 0.35
RAB40B-206ENST00000571995 C7orf43Q8WVR3 580 aa17.27■□□□□ 0.35
RAB40B-206ENST00000571995 CPB2Q96IY4 423 aa17.27■□□□□ 0.35
RAB40B-206ENST00000571995 ERP44Q9BS26 406 aa17.27■□□□□ 0.35
RAB40B-206ENST00000571995 FAM49BQ9NUQ9 324 aa17.27■□□□□ 0.35
RAB40B-206ENST00000571995 SAMD15Q9P1V8 674 aa17.27■□□□□ 0.35
RAB40B-206ENST00000571995 SPAG7O75391 227 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 ANKMY2Q8IV38 441 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 CCDC63Q8NA47 563 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 OR5B17Q8NGF7 314 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 CNTNAP1P78357 1384 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 ZMYM2Q9UBW7 1377 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 EIF3HO15372 352 aaKnown RBP eCLIP17.26■□□□□ 0.35
RAB40B-206ENST00000571995 ADSSP30520 456 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 PTGER2P43116 358 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 MYL6P60660 151 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 VSIG10LQ86VR7 867 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 CCDC13Q8IYE1 715 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 CCT8L2Q96SF2 557 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 PSMD1Q99460 953 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 DDX23Q9BUQ8 820 aaKnown RBP17.26■□□□□ 0.35
RAB40B-206ENST00000571995 TMEM8AQ9HCN3 771 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 UMODL1Q5DID0 1318 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 FRMD3A2A2Y4 597 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 PPP1R37O75864 691 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 CSPG5O95196 566 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 PRKCBP05771 671 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 PSMA2P25787 234 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 NOVP48745 357 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 ERFP50548 548 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 IFI35P80217 286 aaPredicted RBP17.26■□□□□ 0.35
RAB40B-206ENST00000571995 BBS9Q3SYG4 887 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 RFX6Q8HWS3 928 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 APOBEC3FQ8IUX4 373 aaKnown RBP17.26■□□□□ 0.35
RAB40B-206ENST00000571995 RSAD2Q8WXG1 361 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 CCDC77Q9BR77 488 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 CHST7Q9NS84 486 aa17.26■□□□□ 0.35
RAB40B-206ENST00000571995 GOLGA8RI6L899 631 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 CFHP08603 1231 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 ZNF286BP0CG31 522 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 FMNL3Q8IVF7 1028 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 CACNA2D3Q8IZS8 1091 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 ASAP3Q8TDY4 903 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 ZSWIM1Q9BR11 485 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 RPF1Q9H9Y2 349 aaKnown RBP17.25■□□□□ 0.35
RAB40B-206ENST00000571995 SEPT10Q9P0V9 454 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 MYH1P12882 1939 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 H7C0C1 242 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 O00370 1275 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 PDGFRBP09619 1106 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 ATP5OP48047 213 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 IRX4P78413 519 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 CYP24A1Q07973 514 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 COBLL1Q53SF7 1204 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 NLRP14Q86W24 1093 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 MMP19Q99542 508 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 KLF6Q99612 283 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-206ENST00000571995 MRIQ9BWK5 157 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 SYNGAP1Q96PV0 1343 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 RARAP10276 462 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 STX2P32856 288 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms