RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 NCOA4Q13772 614 aa20.92■□□□□ 0.94
RPAIN-210ENST00000571613 SEZ6Q53EL9 994 aa20.92■□□□□ 0.94
RPAIN-210ENST00000571613 LMBRD2Q68DH5 695 aaPredicted RBP20.92■□□□□ 0.94
RPAIN-210ENST00000571613 CD302Q8IX05 232 aa20.92■□□□□ 0.94
RPAIN-210ENST00000571613 CALR3Q96L12 384 aaKnown RBP20.92■□□□□ 0.94
RPAIN-210ENST00000571613 FAM49AQ9H0Q0 323 aaPredicted RBP20.92■□□□□ 0.94
RPAIN-210ENST00000571613 TFR2Q9UP52 801 aa20.92■□□□□ 0.94
RPAIN-210ENST00000571613 DUSP10Q9Y6W6 482 aa20.92■□□□□ 0.94
RPAIN-210ENST00000571613 GPR32O75388 356 aa20.91■□□□□ 0.94
RPAIN-210ENST00000571613 VNN1O95497 513 aa20.91■□□□□ 0.94
RPAIN-210ENST00000571613 PDE6CP51160 858 aa20.91■□□□□ 0.94
RPAIN-210ENST00000571613 TUBB4BP68371 445 aa20.91■□□□□ 0.94
RPAIN-210ENST00000571613 ARHGEF6Q15052 776 aa20.91■□□□□ 0.94
RPAIN-210ENST00000571613 SGSM1Q2NKQ1 1148 aa20.91■□□□□ 0.94
RPAIN-210ENST00000571613 TRAPPC11Q7Z392 1133 aa20.91■□□□□ 0.94
RPAIN-210ENST00000571613 NT5DC4Q86YG4 428 aa20.91■□□□□ 0.94
RPAIN-210ENST00000571613 MNS1Q8NEH6 495 aa20.91■□□□□ 0.94
RPAIN-210ENST00000571613 U2AF1L4Q8WU68 220 aaKnown RBP20.91■□□□□ 0.94
RPAIN-210ENST00000571613 TATDN2Q93075 761 aa20.91■□□□□ 0.94
RPAIN-210ENST00000571613 FAM212AQ96EL1 285 aa20.91■□□□□ 0.94
RPAIN-210ENST00000571613 FAXDC2Q96IV6 333 aa20.91■□□□□ 0.94
RPAIN-210ENST00000571613 PTPRJQ12913 1337 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 GPR25O00155 361 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 STAG3L1P0CL83 205 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 NAP1L1P55209 391 aaKnown RBP20.9■□□□□ 0.94
RPAIN-210ENST00000571613 TRPC3Q13507 836 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 KIZQ2M2Z5 673 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 ZNF677Q86XU0 584 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 GLYCTKQ8IVS8 523 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 CEP112Q8N8E3 955 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 OR5B17Q8NGF7 314 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 TAF4BQ92750 862 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 PPP1R16BQ96T49 567 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 SRRDQ9UH36 339 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 TSKSQ9UJT2 592 aa20.9■□□□□ 0.94
RPAIN-210ENST00000571613 GZMAP12544 262 aa20.89■□□□□ 0.94
RPAIN-210ENST00000571613 DARSP14868 501 aaKnown RBP20.89■□□□□ 0.94
RPAIN-210ENST00000571613 NOP14P78316 857 aaKnown RBP20.89■□□□□ 0.94
RPAIN-210ENST00000571613 CACNB2Q08289 660 aaPredicted RBP20.89■□□□□ 0.94
RPAIN-210ENST00000571613 CUL2Q13617 745 aa20.89■□□□□ 0.94
RPAIN-210ENST00000571613 WHAMMP3Q1A5X7 153 aa20.89■□□□□ 0.94
RPAIN-210ENST00000571613 PAPD7Q5XG87 772 aaKnown RBP20.89■□□□□ 0.94
RPAIN-210ENST00000571613 CATSPER4Q7RTX7 472 aa20.89■□□□□ 0.94
RPAIN-210ENST00000571613 LNX1Q8TBB1 728 aaPredicted RBP20.89■□□□□ 0.94
RPAIN-210ENST00000571613 KAT5Q92993 513 aa20.89■□□□□ 0.94
RPAIN-210ENST00000571613 PI4K2AQ9BTU6 479 aa20.89■□□□□ 0.94
RPAIN-210ENST00000571613 HDAC6Q9UBN7 1215 aa20.89■□□□□ 0.94
RPAIN-210ENST00000571613 CYP26A1O43174 497 aa20.89■□□□□ 0.93
RPAIN-210ENST00000571613 ASS1P00966 412 aaKnown RBP20.89■□□□□ 0.93
RPAIN-210ENST00000571613 EIF4BP23588 611 aaKnown RBP20.89■□□□□ 0.93
RPAIN-210ENST00000571613 TFAMQ00059 246 aaKnown RBP20.89■□□□□ 0.93
RPAIN-210ENST00000571613 NOTUMQ6P988 496 aa20.89■□□□□ 0.93
RPAIN-210ENST00000571613 EPS8L1Q8TE68 723 aa20.89■□□□□ 0.93
RPAIN-210ENST00000571613 ACAP3Q96P50 834 aa20.89■□□□□ 0.93
RPAIN-210ENST00000571613 SAR1BQ9Y6B6 198 aa20.89■□□□□ 0.93
RPAIN-210ENST00000571613 TREHO43280 583 aa20.88■□□□□ 0.93
RPAIN-210ENST00000571613 TMEM253P0C7T8 217 aa20.88■□□□□ 0.93
RPAIN-210ENST00000571613 PRLRP16471 622 aa20.88■□□□□ 0.93
RPAIN-210ENST00000571613 GRM5P41594 1212 aa20.88■□□□□ 0.93
RPAIN-210ENST00000571613 CRYBB1P53674 252 aaPredicted RBP20.88■□□□□ 0.93
RPAIN-210ENST00000571613 RSPH3Q86UC2 560 aa20.88■□□□□ 0.93
RPAIN-210ENST00000571613 DNAJB3Q8WWF6 145 aa20.88■□□□□ 0.93
RPAIN-210ENST00000571613 CTNNBL1Q8WYA6 563 aaPredicted RBP20.88■□□□□ 0.93
RPAIN-210ENST00000571613 CPB2Q96IY4 423 aa20.88■□□□□ 0.93
RPAIN-210ENST00000571613 CCDC94Q9BW85 323 aaPredicted RBP20.88■□□□□ 0.93
RPAIN-210ENST00000571613 MTMR12Q9C0I1 747 aa20.88■□□□□ 0.93
RPAIN-210ENST00000571613 PLEKHA5Q9HAU0 1116 aa20.88■□□□□ 0.93
RPAIN-210ENST00000571613 SEPT11Q9NVA2 429 aaKnown RBP20.88■□□□□ 0.93
RPAIN-210ENST00000571613 RNF186Q9NXI6 227 aa20.88■□□□□ 0.93
RPAIN-210ENST00000571613 PCDHB2Q9Y5E7 798 aa20.88■□□□□ 0.93
RPAIN-210ENST00000571613 ANKRD62A6NC57 917 aa20.87■□□□□ 0.93
RPAIN-210ENST00000571613 CSDE1O75534 798 aaKnown RBP20.87■□□□□ 0.93
RPAIN-210ENST00000571613 MOCS3O95396 460 aa20.87■□□□□ 0.93
RPAIN-210ENST00000571613 HMGCRP04035 888 aa20.87■□□□□ 0.93
RPAIN-210ENST00000571613 KRT5P13647 590 aa20.87■□□□□ 0.93
RPAIN-210ENST00000571613 CYP11B1P15538 503 aa20.87■□□□□ 0.93
RPAIN-210ENST00000571613 CST5P28325 142 aaPredicted RBP20.87■□□□□ 0.93
RPAIN-210ENST00000571613 OSTNP61366 133 aa20.87■□□□□ 0.93
RPAIN-210ENST00000571613 YWHAEP62258 255 aaKnown RBP20.87■□□□□ 0.93
RPAIN-210ENST00000571613 IRX5P78411 483 aaPredicted RBP20.87■□□□□ 0.93
RPAIN-210ENST00000571613 CDR2Q01850 454 aa20.87■□□□□ 0.93
RPAIN-210ENST00000571613 SLC27A1Q6PCB7 646 aa20.87■□□□□ 0.93
RPAIN-210ENST00000571613 RUFY4Q6ZNE9 571 aa20.87■□□□□ 0.93
RPAIN-210ENST00000571613 RPUSD2Q8IZ73 545 aaKnown RBP20.87■□□□□ 0.93
RPAIN-210ENST00000571613 XPNPEP3Q9NQH7 507 aa20.87■□□□□ 0.93
RPAIN-210ENST00000571613 NOCTQ9UK39 431 aaKnown RBP20.87■□□□□ 0.93
RPAIN-210ENST00000571613 PCDHGC5Q9Y5F6 944 aa20.87■□□□□ 0.93
RPAIN-210ENST00000571613 RTN2O75298 545 aa20.86■□□□□ 0.93
RPAIN-210ENST00000571613 TRPA1O75762 1119 aa20.86■□□□□ 0.93
RPAIN-210ENST00000571613 SGPL1O95470 568 aa20.86■□□□□ 0.93
RPAIN-210ENST00000571613 CXCL8P10145 99 aa20.86■□□□□ 0.93
RPAIN-210ENST00000571613 AMPD2Q01433 879 aa20.86■□□□□ 0.93
RPAIN-210ENST00000571613 PPP1R2P3Q6NXS1 205 aa20.86■□□□□ 0.93
RPAIN-210ENST00000571613 CDR2LQ86X02 465 aaPredicted RBP20.86■□□□□ 0.93
RPAIN-210ENST00000571613 CEP120Q8N960 986 aa20.86■□□□□ 0.93
RPAIN-210ENST00000571613 PCSK9Q8NBP7 692 aaKnown RBP20.86■□□□□ 0.93
RPAIN-210ENST00000571613 PXYLP1Q8TE99 480 aa20.86■□□□□ 0.93
RPAIN-210ENST00000571613 UBE2Q2Q8WVN8 375 aa20.86■□□□□ 0.93
RPAIN-210ENST00000571613 OSMRQ99650 979 aa20.86■□□□□ 0.93
RPAIN-210ENST00000571613 PACSIN1Q9BY11 444 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms