RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 MAGEA4P43358 317 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 ANKRD20A8PQ5CZ79 823 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 LDHDQ86WU2 507 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 CCDC125Q86Z20 511 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 TTLL6Q8N841 843 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 CCNYQ8ND76 341 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 CCT6BQ92526 530 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 NPHS2Q9NP85 383 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 KCND2Q9NZV8 630 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 GTF3C4Q9UKN8 822 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 G3BP2Q9UN86 482 aaKnown RBP11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 MSH4O15457 936 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 SRGAP2CP0DJJ0 459 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 KITP10721 976 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 SEPT6Q14141 434 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 BTNL9Q6UXG8 535 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 RFX8Q6ZV50 586 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 DPP9Q86TI2 863 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 RHPN2Q8IUC4 686 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 THNSL1Q8IYQ7 743 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 RNF169Q8NCN4 708 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 DDX27Q96GQ7 796 aaKnown RBP11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 POLR3CQ9BUI4 534 aaPredicted RBP11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 ATP6V0A4Q9HBG4 840 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 RAVER2Q9HCJ3 691 aaKnown RBP11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 GABBR1Q9UBS5 961 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 SLC9A2Q9UBY0 812 aa11.79□□□□□ -0.52
PCDHGA4-201ENST00000571252 ENO4A6NNW6 628 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 CAPN9O14815 690 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 UBOX5O94941 541 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 NQO1P15559 274 aaKnown RBP11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 TBXAS1P24557 533 aaPredicted RBP11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 EPC2Q52LR7 807 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 CDC42EP5Q6NZY7 148 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 LONP2Q86WA8 852 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 ST13P4Q8IZP2 240 aaPredicted RBP11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 GPD1LQ8N335 351 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 PRR12Q9ULL5 1215 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 ANP32DO95626 131 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 HNRNPH3P31942 346 aaKnown RBP11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 ERFP50548 548 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 DTX3LQ8TDB6 740 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 KLC2Q9H0B6 622 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 SMYD3Q9H7B4 428 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 SMYD2Q9NRG4 433 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 PARVAQ9NVD7 372 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 HEY1Q9Y5J3 304 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 DISP2A7MBM2 1401 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 NUP188Q5SRE5 1749 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 CES2O00748 559 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 TRAPPC3O43617 180 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 GPC4O75487 556 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 GSTA1P08263 222 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 KRT7P08729 469 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 YWHABP31946 246 aaKnown RBP11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 SFNP31947 248 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 EPHB1P54762 984 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 IGBP1P78318 339 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 DALRD3Q5D0E6 543 aaKnown RBP11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 PPP6R3Q5H9R7 873 aaPredicted RBP11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 RAPH1Q70E73 1250 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 PDZD4Q76G19 769 aaPredicted RBP11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 DEPDC1BQ8WUY9 529 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 NLRP7Q8WX94 980 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 RPS6KC1Q96S38 1066 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 GIPC1O14908 333 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 KLC1Q07866 573 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 ZNF667Q5HYK9 610 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 PRR5LQ6MZQ0 368 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 LRRC55Q6ZSA7 311 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 DNAAF3Q8N9W5 541 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 ATG4AQ8WYN0 398 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 BAP1Q92560 729 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 BTBD6Q96KE9 485 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 SLC13A1Q9BZW2 595 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 UBN1Q9NPG3 1134 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 FEM1BQ9UK73 627 aa11.78□□□□□ -0.52
PCDHGA4-201ENST00000571252 DDX3XO00571 662 aaKnown RBP eCLIP11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 P4HA2O15460 535 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 ECE1P42892 770 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 TFDP1Q14186 410 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 RPS6KA2Q15349 733 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 SURF1Q15526 300 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 NPY5RQ15761 445 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 MMEL1Q495T6 779 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 RC3H1Q5TC82 1133 aaKnown RBP11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 RTKN2Q8IZC4 609 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 CNPY4Q8N129 248 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 C7orf31Q8N865 590 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 ATP8B4Q8TF62 1192 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 FOXP3Q9BZS1 431 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 CDC42EP4Q9H3Q1 356 aaKnown RBP11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 STRIP2Q9ULQ0 834 aa11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 APOBEC2Q9Y235 224 aaKnown RBP11.77□□□□□ -0.52
PCDHGA4-201ENST00000571252 MYH2Q9UKX2 1941 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 NWD2Q9ULI1 1742 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 UBE4BO95155 1302 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 PSMC6P62333 389 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 KCTD17Q8N5Z5 321 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms