RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 ANKLE1Q8NAG6 615 aa18.68■□□□□ 0.58
RPAIN-208ENST00000571043 SEMA4DQ92854 862 aa18.68■□□□□ 0.58
RPAIN-208ENST00000571043 NT5C1BQ96P26 610 aa18.68■□□□□ 0.58
RPAIN-208ENST00000571043 POP1Q99575 1024 aaKnown RBP18.68■□□□□ 0.58
RPAIN-208ENST00000571043 MRPL4Q9BYD3 311 aaKnown RBP18.68■□□□□ 0.58
RPAIN-208ENST00000571043 SUGCTQ9HAC7 445 aa18.68■□□□□ 0.58
RPAIN-208ENST00000571043 HYOU1Q9Y4L1 999 aa18.68■□□□□ 0.58
RPAIN-208ENST00000571043 MAGEB2O15479 319 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 BUB1O43683 1085 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 DLATP10515 647 aaKnown RBP18.67■□□□□ 0.58
RPAIN-208ENST00000571043 TNFAIP3P21580 790 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 ITGA7Q13683 1181 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 TFDP1Q14186 410 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 FBXO38Q6PIJ6 1188 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 CRELD2Q6UXH1 353 aaPredicted RBP18.67■□□□□ 0.58
RPAIN-208ENST00000571043 ENOSF1Q7L5Y1 443 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 FAM71AQ8IYT1 594 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 HELQQ8TDG4 1101 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 TAS1R2Q8TE23 839 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 TRAPPC12Q8WVT3 735 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 FNBP1Q96RU3 617 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 MSTO1Q9BUK6 570 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 HAPLN2Q9GZV7 340 aa18.67■□□□□ 0.58
RPAIN-208ENST00000571043 TOPORSQ9NS56 1045 aaPredicted RBP18.67■□□□□ 0.58
RPAIN-208ENST00000571043 ARGLU1Q9NWB6 273 aaPredicted RBP18.67■□□□□ 0.58
RPAIN-208ENST00000571043 SUCLA2Q9P2R7 463 aaPredicted RBP18.67■□□□□ 0.58
RPAIN-208ENST00000571043 LRRN2O75325 713 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 NLRP11P59045 1033 aaKnown RBP18.66■□□□□ 0.58
RPAIN-208ENST00000571043 IGBP1P78318 339 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 HIC1Q14526 733 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 GLYCTKQ8IVS8 523 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 SLC43A3Q8NBI5 491 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 RNF149Q8NC42 400 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 PPP1R13LQ8WUF5 828 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 LMBR1Q8WVP7 490 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 SHC3Q92529 594 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 ZBTB45Q96K62 511 aaPredicted RBP18.66■□□□□ 0.58
RPAIN-208ENST00000571043 KREMEN1Q96MU8 473 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 AGPAT1Q99943 283 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 STARD7Q9NQZ5 370 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 GTF2IRD1Q9UHL9 959 aa18.66■□□□□ 0.58
RPAIN-208ENST00000571043 MBLAC1A4D2B0 266 aaPredicted RBP18.65■□□□□ 0.58
RPAIN-208ENST00000571043 SRGAP2O75044 1071 aa18.65■□□□□ 0.58
RPAIN-208ENST00000571043 TOM1L1O75674 476 aa18.65■□□□□ 0.58
RPAIN-208ENST00000571043 PALMO75781 387 aa18.65■□□□□ 0.58
RPAIN-208ENST00000571043 C22orf31O95567 290 aa18.65■□□□□ 0.58
RPAIN-208ENST00000571043 EDN1P05305 212 aa18.65■□□□□ 0.58
RPAIN-208ENST00000571043 GNAT1P11488 350 aa18.65■□□□□ 0.58
RPAIN-208ENST00000571043 PTPN11Q06124 597 aaPredicted RBP18.65■□□□□ 0.58
RPAIN-208ENST00000571043 MAPK6Q16659 721 aa18.65■□□□□ 0.58
RPAIN-208ENST00000571043 ZACNQ401N2 412 aa18.65■□□□□ 0.58
RPAIN-208ENST00000571043 MTHFD1LQ6UB35 978 aa18.65■□□□□ 0.58
RPAIN-208ENST00000571043 PPM1KQ8N3J5 372 aa18.65■□□□□ 0.58
RPAIN-208ENST00000571043 LRRC71Q8N4P6 559 aa18.65■□□□□ 0.58
RPAIN-208ENST00000571043 SEZ6LQ9BYH1 1024 aa18.65■□□□□ 0.58
RPAIN-208ENST00000571043 RBAKQ9NYW8 714 aaPredicted RBP18.65■□□□□ 0.58
RPAIN-208ENST00000571043 C17orf102A2RUQ5 167 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 CLDN3O15551 220 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 C4BPAP04003 597 aaKnown RBP18.64■□□□□ 0.58
RPAIN-208ENST00000571043 PRKCBP05771 671 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 TMEM253P0C7T8 217 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 MATR3P43243 847 aaKnown RBP eCLIP18.64■□□□□ 0.58
RPAIN-208ENST00000571043 ACOT2P49753 483 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 GCNT1Q02742 428 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 POU5F1BQ06416 359 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 PRPF4BQ13523 1007 aaKnown RBP18.64■□□□□ 0.58
RPAIN-208ENST00000571043 EFCAB12Q6NXP0 572 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 ZNF572Q7Z3I7 529 aaPredicted RBP18.64■□□□□ 0.58
RPAIN-208ENST00000571043 LINC01465Q8N7H1 131 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 ZNF516Q92618 1163 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 OSBPL9Q96SU4 736 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 CGRRF1Q99675 332 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 ACO2Q99798 780 aaKnown RBP18.64■□□□□ 0.58
RPAIN-208ENST00000571043 TLR10Q9BXR5 811 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 NFKBIZQ9BYH8 718 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 ANKFY1Q9P2R3 1169 aa18.64■□□□□ 0.58
RPAIN-208ENST00000571043 GRID2IPA4D2P6 1211 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 TUBBP07437 444 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 SRGAP2CP0DJJ0 459 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 COL6A1P12109 1028 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 TNNI1P19237 187 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 CDK7P50613 346 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 AP3M2P53677 418 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 GALCP54803 685 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 MEI1Q5TIA1 1274 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 RHPN2Q8IUC4 686 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 MSANTD4Q8NCY6 345 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 KAT5Q92993 513 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 ZBTB10Q96DT7 871 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 MMS19Q96T76 1030 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 FZD8Q9H461 694 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 RNF14Q9UBS8 474 aa18.64■□□□□ 0.57
RPAIN-208ENST00000571043 A0A0U1RQG5 324 aaPredicted RBP18.63■□□□□ 0.57
RPAIN-208ENST00000571043 ARVCFO00192 962 aa18.63■□□□□ 0.57
RPAIN-208ENST00000571043 ACKR2O00590 384 aa18.63■□□□□ 0.57
RPAIN-208ENST00000571043 TREHO43280 583 aa18.63■□□□□ 0.57
RPAIN-208ENST00000571043 ZSCAN20P17040 1043 aaPredicted RBP18.63■□□□□ 0.57
RPAIN-208ENST00000571043 PTENP60484 403 aa18.63■□□□□ 0.57
RPAIN-208ENST00000571043 ZNF200P98182 395 aaPredicted RBP18.63■□□□□ 0.57
RPAIN-208ENST00000571043 ITIH3Q06033 890 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms