RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 PCK1P35558 622 aa16.31■□□□□ 0.2
USP43-202ENST00000570475 NOP14P78316 857 aaKnown RBP16.31■□□□□ 0.2
USP43-202ENST00000570475 SMAD1Q15797 465 aaKnown RBP16.31■□□□□ 0.2
USP43-202ENST00000570475 DACT2Q5SW24 774 aa16.31■□□□□ 0.2
USP43-202ENST00000570475 SWT1Q5T5J6 900 aaKnown RBP16.31■□□□□ 0.2
USP43-202ENST00000570475 ZBED8Q8IZ13 594 aa16.31■□□□□ 0.2
USP43-202ENST00000570475 SPOCK2Q92563 424 aa16.31■□□□□ 0.2
USP43-202ENST00000570475 TMEM237Q96Q45 408 aa16.31■□□□□ 0.2
USP43-202ENST00000570475 ZWILCHQ9H900 591 aa16.31■□□□□ 0.2
USP43-202ENST00000570475 SUFUQ9UMX1 484 aa16.31■□□□□ 0.2
USP43-202ENST00000570475 ANP32DO95626 131 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 MYBL1P10243 752 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 NOVP48745 357 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 IL9RQ01113 521 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 STRN3Q13033 797 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 PPP2R5CQ13362 524 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.3■□□□□ 0.2
USP43-202ENST00000570475 TMEM143Q96AN5 459 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 ERP27Q96DN0 273 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 BORCS6Q96GS4 357 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 IMPG2Q9BZV3 1241 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 QTRT2Q9H974 415 aaKnown RBP16.3■□□□□ 0.2
USP43-202ENST00000570475 ZNF277Q9NRM2 450 aaPredicted RBP16.3■□□□□ 0.2
USP43-202ENST00000570475 GTF3C4Q9UKN8 822 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 CHRNB2P17787 502 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 NPTX2P47972 431 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 ALDH5A1P51649 535 aaPredicted RBP16.3■□□□□ 0.2
USP43-202ENST00000570475 CDR2Q01850 454 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 POU5F1Q01860 360 aaKnown RBP16.3■□□□□ 0.2
USP43-202ENST00000570475 EIF1ADQ8N9N8 165 aaKnown RBP16.3■□□□□ 0.2
USP43-202ENST00000570475 GRK7Q8WTQ7 553 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 MBOAT7Q96N66 472 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 KDM4CQ9H3R0 1056 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 NAALADL1Q9UQQ1 740 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 EP400Q96L91 3159 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 PLIN4Q96Q06 1357 aa16.3■□□□□ 0.2
USP43-202ENST00000570475 KRT19P08727 400 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 TARSP26639 723 aaKnown RBP16.29■□□□□ 0.2
USP43-202ENST00000570475 GBP1P32455 592 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 EEPD1Q7L9B9 569 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 CYP4X1Q8N118 509 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 GMCL1P1Q8NEA9 526 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 LRRC8CQ8TDW0 803 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 BANF1O75531 89 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 RPS6P62753 249 aaKnown RBP16.29■□□□□ 0.2
USP43-202ENST00000570475 RNASELQ05823 741 aaKnown RBP16.29■□□□□ 0.2
USP43-202ENST00000570475 OVGP1Q12889 678 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 TKFCQ3LXA3 575 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 IWS1Q96ST2 819 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 IKBKGQ9Y6K9 419 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 AFF2P51816 1311 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 ATP2A1O14983 1001 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 SNX3O60493 162 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 NUDT17P0C025 328 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 ARSEP51690 589 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 SMTNL2Q2TAL5 461 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 PRAMEF18Q5VWM3 479 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 C11orf63Q6NUN7 778 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 ZC3H3Q8IXZ2 948 aaKnown RBP16.29■□□□□ 0.2
USP43-202ENST00000570475 ATL2Q8NHH9 583 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 AGAP11Q8TF27 550 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 RPS6KC1Q96S38 1066 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 SMC6Q96SB8 1091 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 OSBPL8Q9BZF1 889 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 SLCO1B3Q9NPD5 702 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 SAE1Q9UBE0 346 aaPredicted RBP16.29■□□□□ 0.2
USP43-202ENST00000570475 TBX20Q9UMR3 447 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 PCDHA3Q9Y5H8 950 aa16.29■□□□□ 0.2
USP43-202ENST00000570475 PLCB4Q15147 1175 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 BBS9Q3SYG4 887 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 ACAD10Q6JQN1 1059 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 ATXN2LQ8WWM7 1075 aaKnown RBP16.28■□□□□ 0.2
USP43-202ENST00000570475 COL20A1Q9P218 1284 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 TTC4O95801 387 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 ALDH3A1P30838 453 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 POLGP54098 1239 aaPredicted RBP16.28■□□□□ 0.2
USP43-202ENST00000570475 ANKRD35Q8N283 1001 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 PPP1R12CQ9BZL4 782 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 EPB41L4BQ9H329 900 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 GEMIN8Q9NWZ8 242 aaKnown RBP16.28■□□□□ 0.2
USP43-202ENST00000570475 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.28■□□□□ 0.2
USP43-202ENST00000570475 NXF1Q9UBU9 619 aaKnown RBP16.28■□□□□ 0.2
USP43-202ENST00000570475 HAO1Q9UJM8 370 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 ARL2BPQ9Y2Y0 163 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 COL14A1Q05707 1796 aaKnown RBP16.28■□□□□ 0.2
USP43-202ENST00000570475 A0A0G2JND7 137 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 PDHA1P08559 390 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 NQO1P15559 274 aaKnown RBP16.28■□□□□ 0.2
USP43-202ENST00000570475 WDR78Q5VTH9 848 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 TRMT10CQ7L0Y3 403 aaKnown RBP16.28■□□□□ 0.2
USP43-202ENST00000570475 CTAGE3PQ8IX95 158 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 CCDC89Q8N998 374 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 PARD3BQ8TEW8 1205 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 ZNF317Q96PQ6 595 aaPredicted RBP16.28■□□□□ 0.2
USP43-202ENST00000570475 DMAC2Q9NW81 257 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 PCSK1NQ9UHG2 260 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 FZD1Q9UP38 647 aa16.28■□□□□ 0.2
USP43-202ENST00000570475 PIK3R2O00459 728 aa16.27■□□□□ 0.2
USP43-202ENST00000570475 VIL1P09327 827 aaKnown RBP16.27■□□□□ 0.2
USP43-202ENST00000570475 ITIH2P19823 946 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms