RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 TESK1Q15569 626 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 FSCN1Q16658 493 aaKnown RBP7.07□□□□□ -1.28
UBFD1-209ENST00000569919 E4F1Q66K89 784 aaPredicted RBP7.07□□□□□ -1.28
UBFD1-209ENST00000569919 SNRNP48Q6IEG0 339 aaKnown RBP7.07□□□□□ -1.28
UBFD1-209ENST00000569919 ARMCX2Q7L311 632 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 FGD2Q7Z6J4 655 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 DEFB128Q7Z7B8 93 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 HERC6Q8IVU3 1022 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 AMOTL1Q8IY63 956 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 CHST13Q8NET6 341 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 MISP3Q96FF7 219 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 PTCHD1Q96NR3 888 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 PHF20Q9BVI0 1012 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 UPF3BQ9BZI7 483 aaKnown RBP7.07□□□□□ -1.28
UBFD1-209ENST00000569919 UBE2ZQ9H832 354 aaPredicted RBP7.07□□□□□ -1.28
UBFD1-209ENST00000569919 DCP1AQ9NPI6 582 aaPredicted RBP7.07□□□□□ -1.28
UBFD1-209ENST00000569919 MAGEC2Q9UBF1 373 aaPredicted RBP7.07□□□□□ -1.28
UBFD1-209ENST00000569919 ZNF281Q9Y2X9 895 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 RIPK3Q9Y572 518 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 NPFFR2Q9Y5X5 522 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 A0A0G2JMZ2 1700 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 LRRC37A2A6NM11 1700 aa7.07□□□□□ -1.28
UBFD1-209ENST00000569919 CDH23Q9H251 3354 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 NPHP3-ACAD11A0A0J9YXS1 232 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 AQP7O14520 342 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 ANP32CO43423 234 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 LPXNO60711 386 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 SURF6O75683 361 aaKnown RBP7.06□□□□□ -1.28
UBFD1-209ENST00000569919 DNAJC8O75937 253 aaPredicted RBP7.06□□□□□ -1.28
UBFD1-209ENST00000569919 BAIAP3O94812 1187 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 LTBRP36941 435 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 ATP8B2P98198 1209 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 IKZF1Q13422 519 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 FAM83BQ5T0W9 1011 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 IQCEQ6IPM2 695 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 CNNM4Q6P4Q7 775 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 RSPO2Q6UXX9 243 aaPredicted RBP7.06□□□□□ -1.28
UBFD1-209ENST00000569919 CPXCR1Q8N123 301 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 NAT16Q8N8M0 369 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.06□□□□□ -1.28
UBFD1-209ENST00000569919 DIO2Q92813 273 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 DYNLL2Q96FJ2 89 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 MAGEB10Q96LZ2 347 aaPredicted RBP7.06□□□□□ -1.28
UBFD1-209ENST00000569919 PRRX2Q99811 253 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 SLF1Q9BQI6 1058 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 FTOQ9C0B1 505 aaKnown RBP eCLIP7.06□□□□□ -1.28
UBFD1-209ENST00000569919 BRINP2Q9C0B6 783 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 ALDH8A1Q9H2A2 487 aaPredicted RBP7.06□□□□□ -1.28
UBFD1-209ENST00000569919 PCDH12Q9NPG4 1184 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 ATP8A2Q9NTI2 1148 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 INTS7Q9NVH2 962 aaKnown RBP7.06□□□□□ -1.28
UBFD1-209ENST00000569919 FAM50BQ9Y247 325 aa7.06□□□□□ -1.28
UBFD1-209ENST00000569919 hCG_2014768A0A024R1R8 64 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 TRBV23OR9-2A0A075B6M9 112 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.05□□□□□ -1.28
UBFD1-209ENST00000569919 IPO8O15397 1037 aaKnown RBP7.05□□□□□ -1.28
UBFD1-209ENST00000569919 CRTAMO95727 393 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 HMGB1P09429 215 aaKnown RBP7.05□□□□□ -1.28
UBFD1-209ENST00000569919 IQCF3P0C7M6 154 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 CYP2C9P11712 490 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 LCP1P13796 627 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 OAZ1P54368 228 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 PSMC6P62333 389 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 KCNAB2Q13303 367 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 BFSP2Q13515 415 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 SLC9C2Q5TAH2 1124 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 TLK2Q86UE8 772 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 LRRTM3Q86VH5 581 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 THNSL2Q86YJ6 484 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 CPNE8Q86YQ8 564 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 TMEM52Q8NDY8 209 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 BCL7CQ8WUZ0 217 aaPredicted RBP7.05□□□□□ -1.28
UBFD1-209ENST00000569919 ZFYVE21Q9BQ24 234 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 TARS2Q9BW92 718 aaKnown RBP7.05□□□□□ -1.28
UBFD1-209ENST00000569919 KATNBL1Q9H079 304 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 CCDC8Q9H0W5 538 aaPredicted RBP7.05□□□□□ -1.28
UBFD1-209ENST00000569919 CARS2Q9HA77 564 aaKnown RBP7.05□□□□□ -1.28
UBFD1-209ENST00000569919 GPR27Q9NS67 375 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 ERVK13-1Q9NX77 482 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 CTNNA3Q9UI47 895 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 DBNLQ9UJU6 430 aaKnown RBP7.05□□□□□ -1.28
UBFD1-209ENST00000569919 NOP58Q9Y2X3 529 aaKnown RBP7.05□□□□□ -1.28
UBFD1-209ENST00000569919 PCDHA9Q9Y5H5 950 aa7.05□□□□□ -1.28
UBFD1-209ENST00000569919 TNPO3Q9Y5L0 923 aaKnown RBP7.05□□□□□ -1.28
UBFD1-209ENST00000569919 MYO5AQ9Y4I1 1855 aaKnown RBP7.04□□□□□ -1.28
UBFD1-209ENST00000569919 ASTN1O14525 1302 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 ZNF536O15090 1300 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 TNKSO95271 1327 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 COL11A1P12107 1806 aaPredicted RBP7.04□□□□□ -1.28
UBFD1-209ENST00000569919 F5H6K3 240 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 RASGRP1O95267 797 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 PARNO95453 639 aaKnown RBP7.04□□□□□ -1.28
UBFD1-209ENST00000569919 CYP2D6P10635 497 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 KCNA5P22460 613 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 GPR85P60893 370 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 ERVK-21P61565 698 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 AMPD3Q01432 767 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 GUCY1A3Q02108 690 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 CNTN2Q02246 1040 aa7.04□□□□□ -1.28
UBFD1-209ENST00000569919 KLRC3Q07444 240 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms