RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 LAMA3Q16787 3333 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-219ENST00000569882 CCDC169A6NNP5 214 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 ZBTB42B2RXF5 422 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 TGFBR3LH3BV60 316 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 GPR32O75388 356 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 CSDE1O75534 798 aaKnown RBP5.33□□□□□ -1.56
CNOT1-219ENST00000569882 SRGAP2BP0DMP2 458 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 FGFR1P11362 822 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 LAG3P18627 525 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 NFKB1P19838 968 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 U2AF2P26368 475 aaKnown RBP eCLIP5.33□□□□□ -1.564e-13■□□□□ 11.3
CNOT1-219ENST00000569882 UBA7P41226 1012 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 ALDH7A1P49419 539 aaKnown RBP5.33□□□□□ -1.56
CNOT1-219ENST00000569882 ERVK-21P61565 698 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 CEBPZQ03701 1054 aaKnown RBP5.33□□□□□ -1.56
CNOT1-219ENST00000569882 KRT17Q04695 432 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 LAMTOR4Q0VGL1 99 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 DMP1Q13316 513 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-219ENST00000569882 GRB10Q13322 594 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 GPNMBQ14956 572 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 TCTN1Q2MV58 587 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 LONRF3Q496Y0 759 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 EPC2Q52LR7 807 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 SRGAP1Q7Z6B7 1085 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 KSR1Q8IVT5 923 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 CMTR2Q8IYT2 770 aaKnown RBP5.33□□□□□ -1.56
CNOT1-219ENST00000569882 FAM200AQ8TCP9 573 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 TMEM40Q8WWA1 233 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 PRPF31Q8WWY3 499 aaKnown RBP5.33□□□□□ -1.56
CNOT1-219ENST00000569882 RPS6KC1Q96S38 1066 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 APOL6Q9BWW8 343 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 MRPL9Q9BYD2 267 aaKnown RBP5.33□□□□□ -1.56
CNOT1-219ENST00000569882 NT5C3AQ9H0P0 336 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 C2orf40Q9H1Z8 148 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 TMEM60Q9H2L4 133 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 ZHX3Q9H4I2 956 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 ENTPD7Q9NQZ7 604 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 RGS18Q9NS28 235 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 DDX19AQ9NUU7 478 aaKnown RBP5.33□□□□□ -1.56
CNOT1-219ENST00000569882 TMEM161AQ9NX61 479 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 NAGPAQ9UK23 515 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 NOVA2Q9UNW9 492 aaKnown RBP5.33□□□□□ -1.56
CNOT1-219ENST00000569882 USP20Q9Y2K6 914 aa5.33□□□□□ -1.56
CNOT1-219ENST00000569882 PRRC2BQ5JSZ5 2229 aaKnown RBP5.33□□□□□ -1.56
CNOT1-219ENST00000569882 A0A087WWV3 80 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 CARNS1A5YM72 827 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 ZBTB39O15060 712 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 EDIL3O43854 480 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 ZC3H11AO75152 810 aaKnown RBP eCLIP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 TBCAO75347 108 aaKnown RBP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 MED24O75448 989 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 DGKIO75912 1065 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 SLITRK3O94933 977 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 EOMESO95936 686 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 RB1P06400 928 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 SPATA31C1P0DKV0 1188 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 XRCC6P12956 609 aaKnown RBP eCLIP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 ITGA4P13612 1032 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 NID1P14543 1247 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 NCLP19338 710 aaKnown RBP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 MUTP22033 750 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 RPA1P27694 616 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 PPM1AP35813 382 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 PRPHP41219 470 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 RARRES1P49788 294 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 IDH3AP50213 366 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 MRPS5P82675 430 aaKnown RBP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 HTRA4P83105 476 aaPredicted RBP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 SPIRE1Q08AE8 756 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 STRN3Q13033 797 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 DRP2Q13474 957 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 BECN1Q14457 450 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 PDIA5Q14554 519 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 DHX8Q14562 1220 aaKnown RBP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 STK38Q15208 465 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 PCBP1Q15365 356 aaKnown RBP eCLIP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 TARBP2Q15633 366 aaKnown RBP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 MAPK6Q16659 721 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 HIF1AQ16665 826 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 ARL6IP4Q66PJ3 421 aaKnown RBP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 NOTUMQ6P988 496 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 CABP7Q86V35 215 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 CATSPER3Q86XQ3 398 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 ECHDC2Q86YB7 292 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 HELQQ8TDG4 1101 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 NUDT8Q8WV74 236 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 FOXD4L4Q8WXT5 416 aaPredicted RBP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 KIFAP3Q92845 792 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 MRPL38Q96DV4 380 aaKnown RBP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 BICD1Q96G01 975 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 TMEM169Q96HH4 297 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 PRIMPOLQ96LW4 560 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 DRC1Q96MC2 740 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 ZNF396Q96N95 335 aaPredicted RBP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 ZNF558Q96NG5 402 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 NAP1L5Q96NT1 182 aaPredicted RBP5.32□□□□□ -1.56
CNOT1-219ENST00000569882 MTMR9Q96QG7 549 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 PLIN2Q99541 437 aa5.32□□□□□ -1.56
CNOT1-219ENST00000569882 TCHPQ9BT92 498 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms