RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 KCNA10Q16322 511 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 PALB2Q86YC2 1186 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 SHC3Q92529 594 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 GTF2IRD1Q9UHL9 959 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 SALL4Q9UJQ4 1053 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 BZW2Q9Y6E2 419 aaKnown RBP11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 MYH10P35580 1976 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 CALCAP01258 141 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 NFICP08651 508 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 TFAMQ00059 246 aaKnown RBP11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 CCSAPQ6IQ19 270 aaPredicted RBP11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 CATSPER4Q7RTX7 472 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 GLYCTKQ8IVS8 523 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 KLHDC9Q8NEP7 349 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 NENFQ9UMX5 172 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 DAAM1Q9Y4D1 1078 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 FRMPD3Q5JV73 1810 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 GRIN2DO15399 1336 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 KPNA6O60684 536 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 CST3P01034 146 aaPredicted RBP11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 HOXD10P28358 340 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 HSP90AA2PQ14568 343 aaPredicted RBP11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 SNX17Q15036 470 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 FAM47CQ5HY64 1035 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 ZNF662Q6ZS27 426 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 FAM71AQ8IYT1 594 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 EIF2AQ9BY44 585 aaKnown RBP11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 CXCL16Q9H2A7 254 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 RPF1Q9H9Y2 349 aaKnown RBP11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 C1orf112Q9NSG2 853 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 LACTBL1A8MY62 500 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 CYP26A1O43174 497 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 CASQ1P31415 396 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 MFAP3P55082 362 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 NCOA4Q13772 614 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 TRAPPC11Q7Z392 1133 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 NAGPAQ9UK23 515 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 KRT86O43790 486 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 PHACTR2O75167 634 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 SGPL1O95470 568 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 NPTXRO95502 500 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 EIF4BP23588 611 aaKnown RBP11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 KIF5AQ12840 1032 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 DDX20Q9UHI6 824 aaKnown RBP11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 NUB1Q9Y5A7 615 aa11.78□□□□□ -0.52
PDXDC1-216ENST00000569715 TUBB4AP04350 444 aa11.77□□□□□ -0.52
PDXDC1-216ENST00000569715 CLTAP09496 248 aa11.77□□□□□ -0.52
PDXDC1-216ENST00000569715 NOP14P78316 857 aaKnown RBP11.77□□□□□ -0.52
PDXDC1-216ENST00000569715 SLC10A6Q3KNW5 377 aa11.77□□□□□ -0.52
PDXDC1-216ENST00000569715 SLC47A2Q86VL8 602 aa11.77□□□□□ -0.52
PDXDC1-216ENST00000569715 SLC30A5Q8TAD4 765 aa11.77□□□□□ -0.52
PDXDC1-216ENST00000569715 CAPN6Q9Y6Q1 641 aa11.77□□□□□ -0.52
PDXDC1-216ENST00000569715 B4GALT4O60513 344 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 FKTNO75072 461 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 ZC3H11AO75152 810 aaKnown RBP eCLIP11.77□□□□□ -0.534e-9■■■■□ 21.2
PDXDC1-216ENST00000569715 CLSTN1O94985 981 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 INHAP05111 366 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 GNAT1P11488 350 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 MYL6P60660 151 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 GCNT1Q02742 428 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 WDR44Q5JSH3 913 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 JADE1Q6IE81 842 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 NOP9Q86U38 636 aaKnown RBP11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 U2AF1L4Q8WU68 220 aaKnown RBP11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 HES2Q9Y543 173 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 RALGAPA2Q2PPJ7 1873 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 PJA2O43164 708 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 MOCS3O95396 460 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 DUOXA2Q1HG44 320 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 ALKBH5Q6P6C2 394 aaKnown RBP11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 EPS8L1Q8TE68 723 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 ERO1AQ96HE7 468 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 TAS2R14Q9NYV8 317 aa11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 NOCTQ9UK39 431 aaKnown RBP11.77□□□□□ -0.53
PDXDC1-216ENST00000569715 TMCO5BA8MYB1 307 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 TMEM191BP0C7N4 346 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 BMS1Q14692 1282 aaKnown RBP11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 TAF3Q5VWG9 929 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 SEPT11Q9NVA2 429 aaKnown RBP11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 URI1O94763 535 aaPredicted RBP11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 CTSHP09668 335 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 CST5P28325 142 aaPredicted RBP11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 GUCY2FP51841 1108 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 CDC42EP1Q00587 391 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 SURF1Q15526 300 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 NAB2Q15742 525 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 LRRN4CLQ8ND94 238 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 MYRIPQ8NFW9 859 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 PXYLP1Q8TE99 480 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 ADPGKQ9BRR6 497 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 TSGA10Q9BZW7 698 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 SIX4Q9UIU6 781 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 PIN4Q9Y237 131 aaKnown RBP11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 BUB1O43683 1085 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 IL18RAPO95256 599 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 ASS1P00966 412 aaKnown RBP11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 TFRCP02786 760 aaKnown RBP11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 KRT5P13647 590 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 CHRNB2P17787 502 aa11.76□□□□□ -0.53
PDXDC1-216ENST00000569715 CUL2Q13617 745 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms