RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 ADAM15Q13444 863 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 POSTNQ15063 836 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 PTPN14Q15678 1187 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 NAB2Q15742 525 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 USP41Q3LFD5 358 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 ZC2HC1CQ53FD0 456 aaPredicted RBP10.7□□□□□ -0.7
CLN6-209ENST00000569336 XKR4Q5GH76 650 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 GLRA4Q5JXX5 417 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 PTCRAQ6ISU1 281 aaPredicted RBP10.7□□□□□ -0.7
CLN6-209ENST00000569336 FUT10Q6P4F1 479 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 PDXDC1Q6P996 788 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 ALKAL1Q6UXT8 129 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 CD302Q8IX05 232 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 GPR65Q8IYL9 337 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 RNF168Q8IYW5 571 aaPredicted RBP10.7□□□□□ -0.7
CLN6-209ENST00000569336 SYCP3Q8IZU3 236 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 POMGNT1Q8WZA1 660 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 STAMQ92783 540 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 CASP10Q92851 521 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 DDX27Q96GQ7 796 aaKnown RBP10.7□□□□□ -0.7
CLN6-209ENST00000569336 ZBTB45Q96K62 511 aaPredicted RBP10.7□□□□□ -0.7
CLN6-209ENST00000569336 C7orf25Q9BPX7 421 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 LRFN3Q9BTN0 628 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 VN1R3Q9BXE9 311 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLN6-209ENST00000569336 DZANK1Q9NVP4 752 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 TBC1D7Q9P0N9 293 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 DPP7Q9UHL4 492 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 CD207Q9UJ71 328 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 NUP210Q8TEM1 1887 aaPredicted RBP10.7□□□□□ -0.7
CLN6-209ENST00000569336 A0A1B0GVL5 298 aa10.69□□□□□ -0.7
CLN6-209ENST00000569336 PVALEFA0A1B0GWK0 134 aa10.69□□□□□ -0.7
CLN6-209ENST00000569336 H3BQ06 376 aaPredicted RBP10.69□□□□□ -0.7
CLN6-209ENST00000569336 KIAA0391O15091 583 aaKnown RBP10.69□□□□□ -0.7
CLN6-209ENST00000569336 FAM189A1O60320 539 aa10.69□□□□□ -0.7
CLN6-209ENST00000569336 GLP2RO95838 553 aa10.69□□□□□ -0.7
CLN6-209ENST00000569336 RPL9P32969 192 aaKnown RBP10.69□□□□□ -0.7
CLN6-209ENST00000569336 GTF2F1P35269 517 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLN6-209ENST00000569336 POU5F1Q01860 360 aaKnown RBP10.69□□□□□ -0.7
CLN6-209ENST00000569336 SMAD4Q13485 552 aaKnown RBP10.69□□□□□ -0.7
CLN6-209ENST00000569336 FAM26FQ5R3K3 315 aa10.69□□□□□ -0.7
CLN6-209ENST00000569336 UNC13DQ70J99 1090 aa10.69□□□□□ -0.7
CLN6-209ENST00000569336 CCDC47Q96A33 483 aaKnown RBP10.69□□□□□ -0.7
CLN6-209ENST00000569336 NECAB3Q96P71 396 aaPredicted RBP10.69□□□□□ -0.7
CLN6-209ENST00000569336 STRA6Q9BX79 667 aa10.69□□□□□ -0.7
CLN6-209ENST00000569336 RPF1Q9H9Y2 349 aaKnown RBP10.69□□□□□ -0.7
CLN6-209ENST00000569336 AGO2Q9UKV8 859 aaKnown RBP10.69□□□□□ -0.7
CLN6-209ENST00000569336 HPSEQ9Y251 543 aa10.69□□□□□ -0.7
CLN6-209ENST00000569336 STYXL1Q9Y6J8 313 aa10.69□□□□□ -0.7
CLN6-209ENST00000569336 NOTCH4Q99466 2003 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 HELZP42694 1942 aaKnown RBP10.68□□□□□ -0.7
CLN6-209ENST00000569336 FAM237AA0A1B0GTK4 181 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 TTC26A0AVF1 554 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 SPDYE4A6NLX3 237 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 PER2O15055 1255 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 LINC01565O15544 149 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 ACTN4O43707 911 aaKnown RBP10.68□□□□□ -0.7
CLN6-209ENST00000569336 B3GAT3O94766 335 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 IL18RAPO95256 599 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 EFEMP2O95967 443 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 LDHAP00338 332 aaKnown RBP10.68□□□□□ -0.7
CLN6-209ENST00000569336 MYBP10242 640 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 HOXB8P17481 243 aaPredicted RBP10.68□□□□□ -0.7
CLN6-209ENST00000569336 GARTP22102 1010 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 LTBRP36941 435 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 AFMP43652 599 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 CLCNKBP51801 687 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 CASP5P51878 434 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 DSG1Q02413 1049 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 UPP1Q16831 310 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 SLC10A6Q3KNW5 377 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 SEZ6Q53EL9 994 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 TMEM31Q5JXX7 168 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 SLC39A4Q6P5W5 647 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 DCLRE1AQ6PJP8 1040 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 TMEM184AQ6ZMB5 413 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.68□□□□□ -0.7
CLN6-209ENST00000569336 FSIP1Q8NA03 581 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 SMRP1Q8NCR6 262 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 HASPINQ8TF76 798 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 AUTS2Q8WXX7 1259 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 KIF12Q96FN5 646 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 POP1Q99575 1024 aaKnown RBP10.68□□□□□ -0.7
CLN6-209ENST00000569336 PAAF1Q9BRP4 392 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 HAPLN2Q9GZV7 340 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 ASB7Q9H672 318 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 EXOC1Q9NV70 894 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 SERTAD1Q9UHV2 236 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 CPSF3Q9UKF6 684 aaKnown RBP10.68□□□□□ -0.7
CLN6-209ENST00000569336 BARX2Q9UMQ3 279 aaPredicted RBP10.68□□□□□ -0.7
CLN6-209ENST00000569336 UBQLN1Q9UMX0 589 aaKnown RBP10.68□□□□□ -0.7
CLN6-209ENST00000569336 DERAQ9Y315 318 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 HCFC2Q9Y5Z7 792 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 MYO16Q9Y6X6 1858 aa10.68□□□□□ -0.7
CLN6-209ENST00000569336 ANAPC1Q9H1A4 1944 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 GRXCR2A6NFK2 248 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 ANKRD63C9JTQ0 380 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 F8W810 466 aa10.67□□□□□ -0.7
CLN6-209ENST00000569336 PODXLO00592 558 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms