RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	ECHS1	P30084	290 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	REST	Q13127	1097 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	MPP3	Q13368	585 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	KLHL22	Q53GT1	634 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	RNF180	Q86T96	592 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	TRMT2A	Q8IZ69	625 aa	Known RBP	4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	RIN2	Q8WYP3	895 aa	Predicted RBP	4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	TEX101	Q9BY14	249 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	ALG13	Q9NP73	1137 aa	Known RBP	4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	KLHL11	Q9NVR0	708 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	MOCS1	Q9NZB8	636 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	RNF181	Q9P0P0	153 aa		4.79	□□□□□ -1.64
UBR1-209	ENST00000569243	PTPN7	P35236	360 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	MPL	P40238	635 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	CHN2	P52757	468 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	NHLH1	Q02575	133 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	ADRM1	Q16186	407 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	MUM1	Q2TAK8	710 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	OTUD7B	Q6GQQ9	843 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	MAPKAPK5	Q8IW41	473 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	TMEM132C	Q8N3T6	1108 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	RNF169	Q8NCN4	708 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	OR56A1	Q8NGH5	318 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	SLC35B2	Q8TB61	432 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	CAGE1	Q8TC20	777 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	LMBR1	Q8WVP7	490 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	CASKIN2	Q8WXE0	1202 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	AUTS2	Q8WXX7	1259 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	CYFIP2	Q96F07	1278 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	NEU1	Q99519	415 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	GREM2	Q9H772	168 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	RBM12	Q9NTZ6	932 aa	Known RBP	4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	DPP7	Q9UHL4	492 aa		4.78	□□□□□ -1.64
UBR1-209	ENST00000569243	PNPLA7	Q6ZV29	1317 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	TEX33	O43247	280 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	KCNAB3	O43448	404 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	FDXR	P22570	491 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	KRTAP5-9	P26371	169 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	GUCY1A2	P33402	732 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	SRSF4	Q08170	494 aa	Known RBP	4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	SCAP	Q12770	1279 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	TP53BP2	Q13625	1128 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	MUM1L1	Q5H9M0	696 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	ZNF425	Q6IV72	752 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243		Q6ZVL8	140 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	KCNK18	Q7Z418	384 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	ASB10	Q8WXI3	467 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	HOXB13	Q92826	284 aa	Predicted RBP	4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	ZBTB9	Q96C00	473 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	RNPEP	Q9H4A4	650 aa		4.77	□□□□□ -1.65
UBR1-209	ENST00000569243	POMC	P01189	267 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	CBSL	P0DN79	551 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	GCSH	P23434	173 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	CBS	P35520	551 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	SREBF1	P36956	1147 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	GYS2	P54840	703 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	ARHGEF25	Q86VW2	580 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	THNSL2	Q86YJ6	484 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	TSPEAR	Q8WU66	669 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	CAAP1	Q9H8G2	361 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	IFT122	Q9HBG6	1241 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	KIAA1586	Q9HCI6	787 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	GALNT9	Q9HCQ5	603 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243	NOX1	Q9Y5S8	564 aa		4.76	□□□□□ -1.65
UBR1-209	ENST00000569243		A0A1B0GTW7	788 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	WDR91	A4D1P6	747 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	UNC119B	A6NIH7	251 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	CGB1	A6NKQ9	187 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	ADCY6	O43306	1168 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	ENDOD1	O94919	500 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	ELANE	P08246	267 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	SOX5	P35711	763 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	MALL	Q13021	153 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	UBXN2B	Q14CS0	331 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	TSHZ3	Q63HK5	1081 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	KRTAP5-4	Q6L8H1	288 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	MED25	Q71SY5	747 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	MRI1	Q9BV20	369 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	DUSP26	Q9BV47	211 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	ALOXE3	Q9BYJ1	711 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	ZNF70	Q9UC06	446 aa	Predicted RBP	4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	KCNE5	Q9UJ90	142 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	TBX22	Q9Y458	520 aa		4.75	□□□□□ -1.65
UBR1-209	ENST00000569243	LRRC3C	A6NJW4	275 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	GOLGA8A	A7E2F4	631 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	TRIM38	O00635	465 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	ITGAM	P11215	1152 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	ATP5J	P18859	108 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	ADSL	P30566	484 aa	Predicted RBP	4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	MCAM	P43121	646 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	RARRES1	P49788	294 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	SLC5A3	P53794	718 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	CDK17	Q00537	523 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	OCA2	Q04671	838 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	MGAT2	Q10469	447 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	ZNF169	Q14929	603 aa	Predicted RBP	4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	AFMID	Q63HM1	303 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms